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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
219
accessible chromatin
170
candidate regulatory elements
target gene predictions
92
differential activity
82
chromatin state
46
binding sites
44
variant allelic effects
31
histone modifications
4
eQTL
2
caQTL
Date released
230
February, 2021
160
September, 2022
155
September, 2023
79
November, 2021
76
February, 2024
38
March, 2023
28
June, 2020
24
May, 2021
23
August, 2021
18
May, 2020
17
January, 2020
15
November, 2022
12
February, 2023
10
January, 2021
10
May, 2024
9
February, 2020
7
April, 2020
7
October, 2022
6
August, 2018
5
October, 2019
4
March, 2020
3
August, 2017
2
March, 2024
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
511
bed bed3+
324
tsv
177
bigWig
79
bed bed9
78
txt
11
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
943
Homo sapiens
Biosample type
723
primary cell
152
tissue
43
cell line
25
in vitro differentiated cells
Organ
837
epithelium
577
kidney
390
brain
390
connective tissue
295
musculature of body
238
vasculature
233
lung
233
pancreas
216
intestine
208
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
137
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
21
lymphatic vessel
19
vein
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
690
AMP
155
KPMP
79
ENCODE
10
T1D
7
LungMap
2
community
Genome assembly (visualization)
593
hg19
229
GRCh38
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
943 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
3
2
2
1
1
2
hepatocyte
13
8
2
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
2
2
1
1
endothelial cell of hepatic sinusoid
4
6
6
+ See 146 more…
tissue
placenta
1
26
14
1
2
1
renal pelvis
2
19
9
1
pigmented layer of retina
20
left renal pelvis
1
6
2
1
right renal pelvis
1
6
2
1
+ See 19 more…
cell line
EndoC_BH1
8
8
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
HTR-8/Svneo
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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