Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 146candidate regulatory elements
  • target gene predictions
  • 74chromatin state
  • 27accessible chromatin
  • 12gene expression
  • 9eQTL
  • 7Fine-mapped variants
  • 7binding sites
  • 7histone modifications
  • 7variant allelic effects
  • 2caQTL
  • 2differential activity
Date released
  • 136September, 2022
  • 92February, 2021
  • 15February, 2024
  • 8November, 2021
  • 6February, 2020
  • 6June, 2020
  • 6March, 2020
  • 5January, 2020
  • 5March, 2025
  • 5May, 2020
  • 3August, 2017
  • 3May, 2022
  • 3October, 2022
  • 2March, 2024
  • 2May, 2019
  • 1August, 2021
  • 1January, 2022
  • 1October, 2019
Available data
  • 204bed bed3+
  • 71bed bed9
  • 19tsv
  • 16bigWig
  • 3bigBed bed9
Organism
  • 300Homo sapiens
Collection Tags
  • 136EpiMap
  • 79ENCODE
  • 23DGA
  • 22 T2DKP
  • 19ChIP-Atlas
  • 15T2DKP
  • 12GTEx
  • 10AMP
  • 6STARNET
  • 4T2D
  • 1T1D
  • 1eQTLCatalogue
Biosample type
  • 241tissue
  • 45primary cell
  • 13cell line
  • 1in vitro differentiated cells
Organ
  • 2882vasculature
  • 2823blood vessel
  • 2802bodily fluid
  • 2793blood
  • 2654vein
  • 836epithelium
  • 577kidney
  • 402connective tissue
  • 391brain
  • 300musculature of body
  • 233lung
  • 233pancreas
  • 216intestine
  • 208heart
  • 195limb
  • 160skin of body
  • 142liver
  • 131embryo
  • 130large intestine
  • 110extraembryonic component
  • 100eye
  • 89stomach
  • 86adipose tissue
  • 73bone element
  • 71artery
  • 68mammary gland
  • 63prostate gland
  • 61small intestine
  • 56placenta
  • 53lymph node
  • 53penis
  • 52adrenal gland
  • 51ureter
  • 39gonad
  • 35esophagus
  • 35thymus
  • 34spinal cord
  • 26spleen
  • 25uterus
  • 22nerve
  • 22testis
  • 21lymphatic vessel
  • 18lymphoid tissue
  • 17thyroid gland
  • 16ovary
  • 15mouth
  • 15skeleton
  • 13bronchus
  • 10bone marrow
  • 10breast
  • 8tongue
  • 8vagina
  • 7urinary bladder
  • 5trachea
  • 3nose
  • 3pituitary gland
  • 1pericardium
Project
  • 292AMP
  • 8ENCODE
Genome assembly (visualization)
  • 287hg19
  • 93GRCh38
annotation_type!
  • target gene predictions
BIOSAMPLE
TYPE

300 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
accessible chromatin
gene expression
eQTL
Fine-mapped variants
binding sites
histone modifications
variant allelic effects
caQTL
differential activity
tissue
muscle of arm331611
muscle of leg27152
muscle of back2813
gastrocnemius medialis841
skeletal muscle tissue63121
primary cell
skeletal muscle satellite cell2252
skeletal muscle fiber522
type I muscle cell3111
type II muscle cell3111
skeletal muscle cell2111
cell line
LHCN-M221111
SJCRH30211
A67321
in vitro differentiated cells
myotube1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego