Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 65accessible chromatin
  • 48gene expression
  • target gene predictions
  • 33differential activity
  • 24candidate regulatory elements
  • 17chromatin state
  • 15eQTL
  • 11variant allelic effects
  • 6histone modifications
  • 5Fine-mapped variants
  • 5binding sites
  • 2sQTL
  • 2variant to gene
Date released
  • 47March, 2023
  • 30September, 2022
  • 29February, 2021
  • 26May, 2021
  • 25February, 2024
  • 11November, 2021
  • 10January, 2021
  • 8August, 2021
  • 7August, 2018
  • 6March, 2020
  • 6May, 2020
  • 6October, 2019
  • 4January, 2022
  • 4June, 2020
  • 3August, 2017
  • 3January, 2020
  • 2February, 2020
  • 2November, 2019
  • 1April, 2019
  • 1February, 2023
  • 1January, 2018
  • 1June, 2021
Available data
  • 127bed bed3+
  • 76tsv
  • 54bigWig
  • 13bed bed9
  • 11bigBed narrowPeak
  • 3bam
  • 3bed gappedPeak
  • 3csv
  • 3xls
  • 2bigBed bed9
Organism
  • 233Homo sapiens
Collection Tags
  • 48HPAP
  • 44 T2DKP
  • 39T2DKP
  • 38T1D
  • 35AMP
  • 26EpiMap
  • 18DGA
  • 14ChIP-Atlas
  • 11ENCODE
  • 9CMDGA
  • 7T2D
  • 5GTEx
  • 4eQTLCatalogue
Biosample type
  • 102primary cell
  • 99tissue
  • 29cell line
  • 3in vitro differentiated cells
Organ
  • 2882vasculature
  • 2823blood vessel
  • 2802bodily fluid
  • 2793blood
  • 2654vein
  • 836epithelium
  • 577kidney
  • 402connective tissue
  • 391brain
  • 300musculature of body
  • 233lung
  • 233pancreas
  • 216intestine
  • 208heart
  • 195limb
  • 160skin of body
  • 142liver
  • 131embryo
  • 130large intestine
  • 110extraembryonic component
  • 100eye
  • 89stomach
  • 86adipose tissue
  • 73bone element
  • 71artery
  • 68mammary gland
  • 63prostate gland
  • 61small intestine
  • 56placenta
  • 53lymph node
  • 53penis
  • 52adrenal gland
  • 51ureter
  • 39gonad
  • 35esophagus
  • 35thymus
  • 34spinal cord
  • 26spleen
  • 25uterus
  • 22nerve
  • 22testis
  • 21lymphatic vessel
  • 18lymphoid tissue
  • 17thyroid gland
  • 16ovary
  • 15mouth
  • 15skeleton
  • 13bronchus
  • 10bone marrow
  • 10breast
  • 8tongue
  • 8vagina
  • 7urinary bladder
  • 5trachea
  • 3nose
  • 3pituitary gland
  • 1pericardium
Project
  • 210AMP
  • 11ENCODE
  • 10T1D
  • 2community
Genome assembly (visualization)
  • 142hg19
  • 54GRCh38
annotation_type!
  • target gene predictions
BIOSAMPLE
TYPE

233 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
gene expression
differential activity
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
primary cell
pancreatic ductal cell633121
pancreatic beta cell8331
pancreatic alpha cell7331
pancreatic acinar cell6331
pancreatic delta cell5331
tissue
islet of Langerhans611313112222
body of pancreas284113
pancreas5531111
endocrine pancreas74
pancreatic ductal cell2
cell line
EndoC_BH18831
Panc121
8988T11
HPDE6-E6E711
pancreatic acinar cell1
in vitro differentiated cells
pancreatic ductal cell3
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego