Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 28candidate regulatory elements
  • target gene predictions
  • 10chromatin state
  • 7binding sites
  • 5histone modifications
  • 3accessible chromatin
Date released
  • 28February, 2021
  • 20September, 2022
  • 3June, 2020
  • 2October, 2022
Available data
  • 43bed bed3+
  • 10bed bed9
Organism
  • 53Homo sapiens
Collection Tags
  • 20ENCODE
  • 20EpiMap
  • 13ChIP-Atlas
Biosample type
  • 34primary cell
  • 11cell line
  • 6in vitro differentiated cells
  • 2tissue
Organ
  • 2882vasculature
  • 2823blood vessel
  • 2802bodily fluid
  • 2793blood
  • 2654vein
  • 836epithelium
  • 577kidney
  • 402connective tissue
  • 391brain
  • 300musculature of body
  • 233lung
  • 233pancreas
  • 216intestine
  • 208heart
  • 195limb
  • 160skin of body
  • 142liver
  • 131embryo
  • 130large intestine
  • 110extraembryonic component
  • 100eye
  • 89stomach
  • 86adipose tissue
  • 73bone element
  • 71artery
  • 68mammary gland
  • 63prostate gland
  • 61small intestine
  • 56placenta
  • 53lymph node
  • 53penis
  • 52adrenal gland
  • 51ureter
  • 39gonad
  • 35esophagus
  • 35thymus
  • 34spinal cord
  • 26spleen
  • 25uterus
  • 22nerve
  • 22testis
  • 21lymphatic vessel
  • 18lymphoid tissue
  • 17thyroid gland
  • 16ovary
  • 15mouth
  • 15skeleton
  • 13bronchus
  • 10bone marrow
  • 10breast
  • 8tongue
  • 8vagina
  • 7urinary bladder
  • 5trachea
  • 3nose
  • 3pituitary gland
  • 1pericardium
Project
  • 53AMP
Genome assembly (visualization)
  • 53hg19
  • 10GRCh38
annotation_type!
  • target gene predictions
BIOSAMPLE
TYPE

53 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
binding sites
histone modifications
accessible chromatin
primary cell
foreskin keratinocyte114
foreskin fibroblast61421
foreskin melanocyte41
cell line
EH21
EL21
ELR21
foreskin fibroblast11
in vitro differentiated cells
foreskin keratinocyte111
foreskin melanocyte111
tissue
skin of prepuce of penis11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego