Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
33
candidate regulatory elements
target gene predictions
18
chromatin state
11
binding sites
8
histone modifications
7
accessible chromatin
2
gene expression
2
variant allelic effects
1
eQTL
Date released
36
February, 2021
30
September, 2022
6
June, 2020
2
January, 2020
2
March, 2024
2
May, 2020
1
August, 2017
1
February, 2024
1
January, 2022
1
October, 2022
Available data
61
bed bed3+
17
bed bed9
2
bigBed bed9
2
tsv
1
bigWig
Organism
82
Homo sapiens
Biosample type
45
cell line
23
primary cell
14
tissue
Organ
837
epithelium
577
kidney
390
brain
390
connective tissue
295
musculature of body
238
vasculature
233
lung
233
pancreas
216
intestine
208
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
137
liver
131
embryo
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
21
lymphatic vessel
19
vein
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
82
AMP
Genome assembly (visualization)
78
hg19
19
GRCh38
annotation_type!
target gene predictions
organ_slims!
large intestine
BIOSAMPLE
TYPE
82 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
binding sites
histone modifications
accessible chromatin
gene expression
variant allelic effects
eQTL
cell line
22Rv1
4
2
1
1
PC-3
2
1
1
1
1
RWPE1
2
1
1
1
1
LNCAP
2
1
1
1
LNCaP clone FGC
3
2
+ See 6 more…
primary cell
endothelial cell of umbilical vein
6
5
2
2
1
epithelial cell of prostate
4
2
luminal epithelial cell of prostatic duct
1
tissue
prostate gland
4
2
2
2
1
1
prostate
1
whole blood
1
See all biosamples
Download