Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 9candidate regulatory elements
  • 4chromatin state
  • target gene predictions
  • 3binding sites
  • 2accessible chromatin
  • 2eQTL
  • 1gene expression
  • 1histone modifications
Date released
  • 8February, 2021
  • 8September, 2022
  • 2January, 2022
  • 2June, 2020
  • 1March, 2024
  • 1October, 2022
Available data
  • 17bed bed3+
  • 4bed bed9
  • 1tsv
Organism
  • 22Homo sapiens
Collection Tags
  • 8EpiMap
  • 6ENCODE
  • 5ChIP-Atlas
  • 2T1D
  • 2T2D
  • 2eQTLCatalogue
  • 1GTEx
Biosample type
  • 15tissue
  • 6cell line
  • 1primary cell
Organ
  • 2882vasculature
  • 2823blood vessel
  • 2802bodily fluid
  • 2793blood
  • 2654vein
  • 836epithelium
  • 577kidney
  • 402connective tissue
  • 391brain
  • 300musculature of body
  • 233lung
  • 233pancreas
  • 216intestine
  • 208heart
  • 195limb
  • 160skin of body
  • 142liver
  • 131embryo
  • 130large intestine
  • 110extraembryonic component
  • 100eye
  • 89stomach
  • 86adipose tissue
  • 73bone element
  • 71artery
  • 68mammary gland
  • 63prostate gland
  • 61small intestine
  • 56placenta
  • 53lymph node
  • 53penis
  • 52adrenal gland
  • 51ureter
  • 39gonad
  • 35esophagus
  • 35thymus
  • 34spinal cord
  • 26spleen
  • 25uterus
  • 22nerve
  • 22testis
  • 21lymphatic vessel
  • 18lymphoid tissue
  • 17thyroid gland
  • 16ovary
  • 15mouth
  • 15skeleton
  • 13bronchus
  • 10bone marrow
  • 10breast
  • 8tongue
  • 8vagina
  • 7urinary bladder
  • 5trachea
  • 3nose
  • 3pituitary gland
  • 1pericardium
Project
  • 22AMP
Genome assembly (visualization)
  • 19hg19
  • 6GRCh38
annotation_type!
  • target gene predictions
BIOSAMPLE
TYPE

22 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
eQTL
gene expression
histone modifications
tissue
testis7311111
cell line
NT2-D1 cell1121
NT2/D11
primary cell
Leydig cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego