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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • target gene predictions
  • 977histone modifications
  • 913accessible chromatin
  • 726binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2588February, 2021
  • 844September, 2022
  • 289June, 2020
  • 281September, 2023
  • 245May, 2021
  • 222November, 2021
  • 199February, 2024
  • 134May, 2020
  • 128August, 2021
  • 105January, 2022
  • 84March, 2020
  • 82January, 2020
  • 70March, 2023
  • 64February, 2020
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 32February, 2023
  • 30March, 2024
  • 28January, 2021
  • 19April, 2020
  • 15May, 2022
  • 13November, 2019
  • 10October, 2022
  • 9August, 2018
  • 9October, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 4596bed bed3+
  • 3576tsv
  • 541bigWig
  • 108txt
  • 26csv
  • 13bigBed narrowPeak
  • 3bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 8228Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 875ENCODE
  • 833EpiMap
  • 448DGA
  • 417AMP
  • 376T1D
  • 292T2DKP
  • 281KPMP
  • 168BLUEPRINT
  • 151GTEx
  • 123 T2DKP
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4294tissue
  • 1925primary cell
  • 1694cell line
  • 361in vitro differentiated cells
Organ
  • 2845vasculature
  • 2793blood vessel
  • 2756bodily fluid
  • 2749blood
  • 2648vein
  • 778epithelium
  • 498kidney
  • 343connective tissue
  • 313brain
  • 225musculature of body
  • 216pancreas
  • 158lung
  • 157heart
  • 156intestine
  • 145limb
  • 124liver
  • 121skin of body
  • 102embryo
  • 93large intestine
  • 89eye
  • 76adipose tissue
  • 76extraembryonic component
  • 65stomach
  • 62artery
  • 57bone element
  • 50mammary gland
  • 50prostate gland
  • 43lymph node
  • 41penis
  • 41small intestine
  • 39placenta
  • 38adrenal gland
  • 38ureter
  • 30gonad
  • 28esophagus
  • 25spinal cord
  • 24thymus
  • 20spleen
  • 20uterus
  • 19lymphatic vessel
  • 18nerve
  • 17testis
  • 13lymphoid tissue
  • 13thyroid gland
  • 12ovary
  • 12skeleton
  • 11bronchus
  • 11mouth
  • 8bone marrow
  • 8breast
  • 6tongue
  • 6vagina
  • 5trachea
  • 5urinary bladder
  • 3pituitary gland
  • 2nose
  • 1pericardium
Project
  • 7704AMP
  • 281KPMP
  • 222ENCODE
  • 32T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4610hg19
  • 755GRCh38
  • 4hg18
annotation_type!
  • target gene predictions
software_used.software.name!
  • chromhmm
BIOSAMPLE
TYPE

8276 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
kidney292101711
heart3715132
stomach401311
islet of Langerhans16211131222
primary cell
monocyte86181154121
CD8-positive, alpha-beta T cell73043
endothelial cell311529122
macrophage31229311
hepatocyte2481132
cell line
A54921111
EndoC_BH1181831
breast cancer cell119
MCF-79212
H1-hESC11118
in vitro differentiated cells
neural progenitor cell515107
hematopoietic multipotent progenitor cell191111
adipocyte41411
cardiomyocytes11
extended pluripotent stem (EPS) cells9
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