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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • target gene predictions
  • 944chromatin state
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 93binding sites
  • 84Fine-mapped variants
  • 74accessible chromatin
  • 13caQTL
  • 7sQTL
  • 4variant to gene
  • 3meQTL
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 1665September, 2022
  • 1019February, 2021
  • 281September, 2023
  • 150February, 2024
  • 137May, 2020
  • 104May, 2021
  • 101January, 2022
  • 101October, 2022
  • 84March, 2020
  • 81August, 2021
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 23January, 2020
  • 19April, 2020
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 3576tsv
  • 2194bed bed3+
  • 869bed bed9
  • 108txt
  • 87bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 4bigBed narrowPeak
  • 1bam
Organism
  • 6717Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1666EpiMap
  • 960ENCODE
  • 385DGA
  • 281KPMP
  • 207T1D
  • 151GTEx
  • 146AMP
  • 101T2D
  • 101eQTLCatalogue
  • 90 T2DKP
  • 81BLUEPRINT
  • 55HPAP
  • 43STARNET
  • 36T2DKP
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
Biosample type
  • 4491tissue
  • 1435primary cell
  • 632cell line
  • 204in vitro differentiated cells
  • 1stem cell
Organ
  • 2825vasculature
  • 2780blood vessel
  • 2738bodily fluid
  • 2731blood
  • 2650vein
  • 566epithelium
  • 519kidney
  • 293brain
  • 272connective tissue
  • 260musculature of body
  • 212lung
  • 182intestine
  • 171heart
  • 171limb
  • 160pancreas
  • 120skin of body
  • 110large intestine
  • 96embryo
  • 94extraembryonic component
  • 93liver
  • 80stomach
  • 76adipose tissue
  • 58small intestine
  • 50artery
  • 47mammary gland
  • 47placenta
  • 47ureter
  • 45adrenal gland
  • 45bone element
  • 43prostate gland
  • 40penis
  • 33eye
  • 31esophagus
  • 31gonad
  • 31lymph node
  • 31spinal cord
  • 31thymus
  • 23spleen
  • 19nerve
  • 17testis
  • 17uterus
  • 15lymphatic vessel
  • 15lymphoid tissue
  • 15thyroid gland
  • 14mouth
  • 14ovary
  • 9breast
  • 8bronchus
  • 8vagina
  • 7skeleton
  • 7tongue
  • 6urinary bladder
  • 4bone marrow
  • 2nose
  • 2pituitary gland
  • 1pericardium
Project
  • 6443AMP
  • 281KPMP
  • 19LungMap
  • 13community
  • 5ITG
  • 4T1D
Genome assembly (visualization)
  • 3108hg19
  • 1130GRCh38
  • 4hg18
annotation_type!
  • target gene predictions
software_used.software.name!
  • macs
BIOSAMPLE
TYPE

6765 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
chromatin state
gene expression
eQTL
differential activity
variant allelic effects
binding sites
Fine-mapped variants
accessible chromatin
caQTL
sQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart372132
stomach401911
kidney2916711
brain2918121
primary cell
common myeloid progenitor, CD34-positive2713
B cell17823
CD4-positive, alpha-beta memory T cell149
monocyte154211
epithelial cell of proximal tubule211611
cell line
A54921181
K562771
MCF-7951
EndoC_BH1831
H1-hESC1181
in vitro differentiated cells
hematopoietic multipotent progenitor cell19101
neural progenitor cell547
adipocyte461
cardiomyocytes11
extended pluripotent stem (EPS) cells9
stem cell
H1-hESC1
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