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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 1709candidate regulatory elements
  • target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • 817binding sites
  • 689gene expression
  • 172differential activity
  • 141variant allelic effects
  • 72Fine-mapped variants
  • 60eQTL
  • 13caQTL
  • 5hQTL
  • 4sQTL
  • 3meQTL
  • 3other
  • 2variant to gene
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2587February, 2021
  • 1677September, 2022
  • 289June, 2020
  • 281September, 2023
  • 250May, 2021
  • 222November, 2021
  • 199February, 2024
  • 137May, 2020
  • 128August, 2021
  • 101October, 2022
  • 88January, 2020
  • 84March, 2020
  • 64March, 2023
  • 63February, 2020
  • 49May, 2022
  • 44November, 2022
  • 38May, 2024
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 28January, 2021
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 11March, 2025
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 4January, 2022
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 4619bed bed3+
  • 3541tsv
  • 869bed bed9
  • 543bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 24csv
  • 13bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9115Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 1666EpiMap
  • 966ENCODE
  • 452DGA
  • 418AMP
  • 294T2DKP
  • 281KPMP
  • 275T1D
  • 202BLUEPRINT
  • 151GTEx
  • 117 T2DKP
  • 94CMDGA
  • 67HPAP
  • 26FNIH_projects-heart
  • 16STARNET
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 10T2D
Biosample type
  • 4717tissue
  • 2095primary cell
  • 1943cell line
  • 405in vitro differentiated cells
  • 1stem cell
Organ
  • 2873vasculature
  • 2814blood vessel
  • 2796bodily fluid
  • 2787blood
  • 2654vein
  • 835epithelium
  • 576kidney
  • 385connective tissue
  • 374brain
  • 293musculature of body
  • 232lung
  • 223pancreas
  • 213intestine
  • 205heart
  • 193limb
  • 157skin of body
  • 138liver
  • 131embryo
  • 128large intestine
  • 109extraembryonic component
  • 99eye
  • 88stomach
  • 77adipose tissue
  • 73bone element
  • 68mammary gland
  • 65artery
  • 62prostate gland
  • 60small intestine
  • 55placenta
  • 53lymph node
  • 53penis
  • 51adrenal gland
  • 51ureter
  • 36gonad
  • 35thymus
  • 33spinal cord
  • 32esophagus
  • 25spleen
  • 24uterus
  • 21lymphatic vessel
  • 21nerve
  • 20testis
  • 18lymphoid tissue
  • 16thyroid gland
  • 15ovary
  • 15skeleton
  • 14mouth
  • 13bronchus
  • 10bone marrow
  • 9breast
  • 8tongue
  • 7urinary bladder
  • 7vagina
  • 5trachea
  • 3nose
  • 2pituitary gland
  • 1pericardium
Project
  • 8595AMP
  • 281KPMP
  • 222ENCODE
  • 32T1D
  • 19LungMap
  • 9community
  • 5ITG
Genome assembly (visualization)
  • 5639hg19
  • 1522GRCh38
  • 4hg18
annotation_type!
  • target gene predictions
software_used.software.name!
  • qTLtools
BIOSAMPLE
TYPE

9163 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
histone modifications
chromatin state
accessible chromatin
binding sites
gene expression
differential activity
variant allelic effects
Fine-mapped variants
eQTL
caQTL
hQTL
sQTL
meQTL
other
variant to gene
representative DNase hypersensitivity sites
tissue
whole blood26351
heart371215132
kidney29216101711
stomach4011931
brain293182111
primary cell
monocyte86181151211
CD8-positive, alpha-beta T cell730143
common myeloid progenitor, CD34-positive2713
endothelial cell31152922
B cell17862
cell line
A5492111812
EndoC_BH1181831
MCF-792513
breast cancer cell119
K56271712
in vitro differentiated cells
neural progenitor cell5154107
hematopoietic multipotent progenitor cell19110111
adipocyte416411
embryonic stem cell1561
cardiomyocytes11
stem cell
H1-hESC1
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