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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2639pQTL
  • 977histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • 876candidate regulatory elements
  • 817binding sites
  • target gene predictions
  • 186eQTL
  • 141variant allelic effects
  • 130differential activity
  • 84Fine-mapped variants
  • 15gene expression
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2411February, 2021
  • 845September, 2022
  • 289June, 2020
  • 222November, 2021
  • 160May, 2021
  • 138February, 2024
  • 137May, 2020
  • 110September, 2023
  • 105January, 2022
  • 101October, 2022
  • 75August, 2021
  • 73March, 2020
  • 71January, 2020
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 28January, 2021
  • 26February, 2020
  • 19April, 2020
  • 15March, 2023
  • 14November, 2019
  • 14October, 2019
  • 9May, 2019
  • 8April, 2019
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 3890bed bed3+
  • 2903tsv
  • 869bed bed9
  • 543bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 13bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 7710Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 938ENCODE
  • 833EpiMap
  • 309AMP
  • 290T2DKP
  • 282T1D
  • 250DGA
  • 164BLUEPRINT
  • 111T2D
  • 110KPMP
  • 101eQTLCatalogue
  • 100CMDGA
  • 96GTEx
  • 79 T2DKP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12HPAP
  • 12ROADMAP
Biosample type
  • 4232tissue
  • 1753cell line
  • 1474primary cell
  • 296in vitro differentiated cells
  • 1stem cell
Organ
  • 2823vasculature
  • 2780blood vessel
  • 2775bodily fluid
  • 2769blood
  • 2651vein
  • 517epithelium
  • 312brain
  • 307connective tissue
  • 300kidney
  • 221musculature of body
  • 162lung
  • 158intestine
  • 151heart
  • 144limb
  • 140pancreas
  • 124skin of body
  • 109liver
  • 95large intestine
  • 94embryo
  • 90eye
  • 77extraembryonic component
  • 65adipose tissue
  • 64stomach
  • 57artery
  • 55bone element
  • 54mammary gland
  • 49prostate gland
  • 45lymph node
  • 43penis
  • 42small intestine
  • 40placenta
  • 38ureter
  • 37adrenal gland
  • 29gonad
  • 26esophagus
  • 25spinal cord
  • 24thymus
  • 19spleen
  • 19uterus
  • 17nerve
  • 17testis
  • 16lymphatic vessel
  • 12lymphoid tissue
  • 12skeleton
  • 12thyroid gland
  • 11bronchus
  • 11ovary
  • 10mouth
  • 9bone marrow
  • 7breast
  • 5tongue
  • 5trachea
  • 5vagina
  • 4urinary bladder
  • 2nose
  • 2pituitary gland
Project
  • 7357AMP
  • 222ENCODE
  • 110KPMP
  • 32T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4796hg19
  • 1624GRCh38
  • 4hg18
annotation_type!
  • target gene predictions
software_used.software.name!
  • r
BIOSAMPLE
TYPE

7758 results

search-icontable-tab-icon
Clear Filters
pQTL
histone modifications
chromatin state
accessible chromatin
candidate regulatory elements
binding sites
eQTL
variant allelic effects
differential activity
Fine-mapped variants
gene expression
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
heart12151812
kidney2161015111
stomach1193211
brain318213121
cell line
A549118132
breast cancer cell119
MCF-725143
EndoC_BH118113
HepG252213
primary cell
monocyte861814121
CD8-positive, alpha-beta T cell30147
macrophage1239311
fibroblast163126
common myeloid progenitor, CD34-positive1314
in vitro differentiated cells
neural progenitor cell154101
hematopoietic multipotent progenitor cell110191
adipocyte16421
embryonic stem cell1561
T-cell acute lymphoblastic leukemia53
stem cell
H1-hESC1
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