Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
57
target gene predictions
44
binding sites
43
candidate regulatory elements
27
chromatin state
23
histone modifications
11
accessible chromatin
2
eQTL
1
gene expression
1
pQTL
Date released
75
September, 2022
66
February, 2021
28
February, 2024
19
October, 2022
11
June, 2020
4
May, 2021
3
August, 2021
2
August, 2017
1
March, 2024
Available data
181
bed bed3+
25
bed bed9
1
tsv
Organism
209
Homo sapiens
Biosample type
205
cell line
primary cell
4
tissue
Organ
417
brain
332
kidney
319
musculature of body
277
lung
266
intestine
235
limb
213
heart
209
bodily fluid
198
blood
168
large intestine
163
embryo
144
pancreas
124
connective tissue
108
stomach
102
epithelium
101
extraembryonic component
95
skin of body
89
vasculature
86
liver
84
adipose tissue
84
blood vessel
80
small intestine
79
eye
78
uterus
75
bone element
68
prostate gland
63
placenta
62
adrenal gland
62
lymph node
61
ureter
48
thymus
46
gonad
42
artery
39
spinal cord
38
mammary gland
35
esophagus
34
spleen
25
testis
24
lymphoid tissue
23
nerve
21
ovary
20
thyroid gland
18
skeleton
17
penis
15
mouth
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
3
vein
2
lymphatic vessel
Project
209
AMP
Genome assembly (visualization)
208
hg19
53
GRCh38
annotation_type!
variant allelic effects
annotation_type!!
variant allelic effects
biosample_type!
in vitro differentiated cells
primary cell
BIOSAMPLE
TYPE
209 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
binding sites
candidate regulatory elements
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
pQTL
cell line
K562
23
2
7
7
1
1
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
2
1
1
1
1
HAP-1
2
1
2
1
1
1
+ See 26 more…
tissue
blood
2
cerebrospinal fluid
1
whole blood
1
See all biosamples
Download