Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
478
gene expression
443
accessible chromatin
344
target gene predictions
328
candidate regulatory elements
210
histone modifications
197
chromatin state
152
differential activity
100
binding sites
variant allelic effects
46
eQTL
9
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
484
September, 2022
455
February, 2021
333
November, 2021
281
September, 2023
256
May, 2021
95
February, 2024
63
May, 2020
55
March, 2023
53
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
28
October, 2022
23
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1451
bed bed3+
591
tsv
378
bigWig
164
bed bed9
108
txt
27
bed bed9+
12
bigBed narrowPeak
4
bigBed bed9
bam
3
bed gappedPeak
3
xls
Organism
2274
Homo sapiens
Biosample type
2586
tissue
2348
cell line
2319
primary cell
446
in vitro differentiated cells
4
stem cell
Organ
757
epithelium
303
kidney
270
connective tissue
160
vasculature
111
blood vessel
99
skin of body
96
pancreas
59
liver
47
musculature of body
45
mammary gland
41
penis
40
extraembryonic component
33
lung
31
heart
29
artery
28
brain
22
embryo
22
eye
20
intestine
19
vein
17
lymphatic vessel
15
bronchus
12
bone element
11
bone marrow
10
adrenal gland
10
placenta
9
blood
9
bodily fluid
9
prostate gland
9
stomach
8
esophagus
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
2
thyroid gland
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1684
AMP
333
ENCODE
281
KPMP
T1D
19
LungMap
2
community
Genome assembly (visualization)
1658
hg19
704
GRCh38
annotation_type!
variant allelic effects
award.project!
T1D
files.file_type!
bam
month_released!
November, 2022
BIOSAMPLE
TYPE
2319 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
17
1
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
3
4
7
30
1
B cell
2
6
10
14
8
endothelial cell
9
14
6
1
2
1
2
+ See 434 more…
See all biosamples
Download