Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
478
gene expression
454
accessible chromatin
369
target gene predictions
367
candidate regulatory elements
210
histone modifications
195
chromatin state
152
differential activity
100
binding sites
variant allelic effects
46
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
486
September, 2022
453
February, 2021
333
November, 2021
281
September, 2023
256
May, 2021
88
February, 2024
63
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
41
May, 2024
40
May, 2022
37
January, 2022
30
October, 2022
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
1
July, 2020
1
March, 2024
Available data
1537
bed bed3+
591
tsv
385
bigWig
162
bed bed9
108
txt
27
bed bed9+
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
2349
Homo sapiens
Biosample type
2542
tissue
2394
primary cell
2347
cell line
461
in vitro differentiated cells
4
stem cell
Organ
767
epithelium
296
kidney
274
connective tissue
154
vasculature
109
pancreas
107
blood vessel
99
skin of body
59
liver
46
musculature of body
45
mammary gland
41
penis
40
extraembryonic component
33
heart
33
lung
29
artery
22
embryo
21
eye
20
brain
20
intestine
20
lymphatic vessel
17
vein
15
bronchus
14
bone element
13
bone marrow
10
adrenal gland
10
placenta
9
blood
9
bodily fluid
9
prostate gland
9
stomach
8
esophagus
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
2
thyroid gland
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1700
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
2
community
Genome assembly (visualization)
1731
hg19
723
GRCh38
annotation_type!
variant allelic effects
files.file_type!
bigBed narrowPeak
month_released!
January, 2020
BIOSAMPLE
TYPE
2394 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
18
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
4
5
7
30
1
B cell
2
6
10
17
8
endothelial cell
9
15
7
3
1
2
1
2
+ See 439 more…
See all biosamples
Download