Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
369
target gene predictions
367
candidate regulatory elements
210
histone modifications
100
binding sites
89
accessible chromatin
variant allelic effects
11
caQTL
6
chromatin state
5
eQTL
3
hQTL
2
meQTL
1
other
Date released
330
February, 2021
324
September, 2022
166
May, 2021
111
November, 2021
52
June, 2020
39
May, 2024
36
February, 2024
30
October, 2022
28
January, 2021
17
May, 2020
9
November, 2022
6
August, 2017
6
May, 2022
4
February, 2023
3
August, 2021
1
January, 2022
1
March, 2020
Available data
1558
bed bed3+
591
tsv
bigWig
164
bed bed9
108
txt
27
bed bed9+
12
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1162
Homo sapiens
Biosample type
2117
cell line
1695
tissue
1163
primary cell
329
in vitro differentiated cells
4
stem cell
Organ
283
epithelium
160
connective tissue
82
vasculature
77
skin of body
60
blood vessel
35
mammary gland
35
penis
30
kidney
29
extraembryonic component
29
pancreas
26
liver
26
musculature of body
20
heart
20
lung
18
artery
16
brain
16
embryo
14
eye
14
vein
11
bronchus
10
bone element
10
lymphatic vessel
9
blood
9
bodily fluid
9
bone marrow
9
intestine
7
placenta
7
prostate gland
5
esophagus
5
trachea
4
adrenal gland
4
stomach
4
uterus
3
large intestine
3
mouth
3
spinal cord
2
gonad
2
small intestine
1
limb
1
ovary
1
thyroid gland
Project
1021
AMP
111
ENCODE
31
T1D
Genome assembly (visualization)
1157
hg19
267
GRCh38
annotation_type!
variant allelic effects
files.file_type!
bigWig
BIOSAMPLE
TYPE
1163 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
histone modifications
binding sites
accessible chromatin
caQTL
chromatin state
eQTL
hQTL
meQTL
other
primary cell
monocyte
2
86
1
2
1
1
CD8-positive, alpha-beta T cell
5
7
30
common myeloid progenitor, CD34-positive
14
27
B cell
10
17
CD14-positive monocyte
19
8
+ See 265 more…
See all biosamples
Download