Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
478
gene expression
426
accessible chromatin
372
target gene predictions
328
candidate regulatory elements
210
histone modifications
195
chromatin state
152
differential activity
100
binding sites
variant allelic effects
46
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
487
September, 2022
455
February, 2021
333
November, 2021
281
September, 2023
256
May, 2021
96
February, 2024
63
May, 2020
56
January, 2021
55
March, 2023
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
30
October, 2022
23
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1462
bed bed3+
591
tsv
401
bigWig
162
bed bed9
108
txt
27
bed bed9+
12
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
2285
Homo sapiens
Biosample type
2533
tissue
2330
primary cell
2186
cell line
441
in vitro differentiated cells
4
stem cell
Organ
760
epithelium
298
kidney
260
connective tissue
157
vasculature
113
pancreas
108
blood vessel
97
skin of body
57
liver
46
musculature of body
43
mammary gland
40
penis
37
extraembryonic component
33
lung
31
heart
27
artery
27
brain
20
embryo
20
eye
20
intestine
18
vein
17
lymphatic vessel
14
bone element
14
bronchus
13
bone marrow
10
adrenal gland
9
placenta
9
prostate gland
9
stomach
8
blood
8
bodily fluid
8
esophagus
6
large intestine
4
mouth
4
small intestine
4
spinal cord
4
trachea
4
uterus
3
gonad
2
ovary
2
thyroid gland
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1636
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
2
community
Genome assembly (visualization)
1668
hg19
700
GRCh38
annotation_type!
variant allelic effects
month_released!
June, 2020
October, 2019
organ_slims!
pituitary gland
BIOSAMPLE
TYPE
2330 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
16
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
4
5
7
30
1
B cell
2
6
10
14
8
endothelial cell
9
15
7
1
2
1
2
+ See 435 more…
See all biosamples
Download