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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1592
candidate regulatory elements
1250
target gene predictions
969
histone modifications
881
accessible chromatin
808
binding sites
660
gene expression
167
differential activity
164
eQTL
variant allelic effects
70
chromatin state
65
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2531
February, 2021
1595
September, 2022
378
May, 2021
321
November, 2021
286
September, 2023
282
June, 2020
266
February, 2024
120
August, 2021
113
March, 2020
102
January, 2022
97
October, 2022
73
May, 2020
72
January, 2020
70
March, 2023
56
January, 2021
53
February, 2020
49
May, 2022
44
November, 2022
35
August, 2017
28
February, 2023
28
March, 2024
19
April, 2020
10
November, 2019
9
August, 2018
8
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5560
bed bed3+
869
tsv
bed bed9
519
bigWig
108
txt
34
bed bed9+
30
bigBed bed9
24
csv
12
bigBed narrowPeak
4
bam
3
bed gappedPeak
xls
Organism
6614
Homo sapiens
Biosample type
2190
primary cell
2098
cell line
1945
tissue
423
in vitro differentiated cells
4
stem cell
Organ
855
epithelium
559
kidney
403
connective tissue
383
brain
297
musculature of body
250
pancreas
240
lung
231
intestine
219
vasculature
heart
193
bodily fluid
188
embryo
186
limb
184
blood
169
skin of body
168
blood vessel
141
large intestine
138
liver
113
extraembryonic component
98
eye
94
stomach
uterus
78
adipose tissue
75
bone element
72
mammary gland
65
small intestine
64
prostate gland
63
artery
58
adrenal gland
57
placenta
54
lymph node
54
penis
48
ureter
42
gonad
38
thymus
36
esophagus
35
spinal cord
28
spleen
22
testis
19
lymphatic vessel
19
lymphoid tissue
19
nerve
19
ovary
18
thyroid gland
18
vein
15
mouth
15
skeleton
13
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
5965
AMP
321
ENCODE
281
KPMP
59
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
5719
hg19
906
GRCh38
4
hg18
annotation_type!
variant allelic effects
files.file_type!
bed bed9
xls
organ_slims!
heart
uterus
BIOSAMPLE
TYPE
6661 results
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table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
differential activity
eQTL
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
1
2
B cell
14
10
6
2
+ See 429 more…
cell line
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
1
EndoC_BH1
1
1
8
1
8
3
MCF-7
9
6
2
1
3
+ See 760 more…
tissue
stomach
40
21
1
3
1
1
kidney
29
14
2
10
1
7
1
brain
29
16
3
2
1
1
2
lung
33
17
1
1
muscle of arm
33
16
1
+ See 240 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
4
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 118 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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