Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
57
target gene predictions
47
candidate regulatory elements
45
binding sites
27
chromatin state
24
histone modifications
12
accessible chromatin
3
eQTL
2
gene expression
Date released
75
September, 2022
72
February, 2021
28
February, 2024
19
October, 2022
12
June, 2020
4
May, 2021
2
August, 2017
2
August, 2021
2
March, 2024
1
January, 2022
Available data
187
bed bed3+
25
bed bed9
2
tsv
Organism
217
Homo sapiens
Biosample type
195
cell line
13
tissue
9
primary cell
Organ
904
epithelium
633
kidney
447
brain
443
connective tissue
368
musculature of body
310
lung
286
intestine
261
pancreas
249
vasculature
244
heart
234
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
193
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
88
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
70
artery
64
penis
62
lymph node
61
ureter
50
gonad
48
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
22
nerve
22
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
15
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
217
AMP
Genome assembly (visualization)
214
hg19
54
GRCh38
annotation_type!
variant allelic effects
files.file_type!
bed gappedPeak
month_released!
May, 2020
BIOSAMPLE
TYPE
217 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
cell line
K562
23
7
2
7
1
1
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
1
2
1
1
1
HAP-1
2
2
1
1
1
1
+ See 23 more…
tissue
vagina
2
4
2
1
1
blood
2
whole blood
1
primary cell
peripheral blood mononuclear cell
4
1
1
peripheral blood stem cell
1
1
1
See all biosamples
Download