Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
25
candidate regulatory elements
21
target gene predictions
19
accessible chromatin
17
chromatin state
14
histone modifications
13
binding sites
7
eQTL
4
gene expression
variant allelic effects
1
caQTL
Date released
46
September, 2022
22
February, 2021
15
February, 2024
10
August, 2021
7
March, 2020
June, 2020
5
November, 2021
3
August, 2017
3
May, 2021
2
January, 2020
2
May, 2022
2
May, 2024
1
January, 2022
1
November, 2019
1
October, 2022
1
September, 2018
Available data
95
bed bed3+
tsv
23
bigWig
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
121
Homo sapiens
Biosample type
50
tissue
41
primary cell
26
cell line
4
in vitro differentiated cells
Organ
569
epithelium
370
kidney
367
connective tissue
361
brain
348
musculature of body
303
lung
273
intestine
213
heart
213
limb
205
bodily fluid
195
embryo
194
blood
193
skin of body
186
pancreas
184
vasculature
165
large intestine
144
blood vessel
140
extraembryonic component
121
liver
112
stomach
99
eye
83
small intestine
82
mammary gland
80
bone element
79
uterus
71
placenta
71
prostate gland
70
adrenal gland
63
adipose tissue
61
penis
60
ureter
54
lymph node
52
artery
48
thymus
44
gonad
39
esophagus
36
spinal cord
32
spleen
23
testis
21
lymphoid tissue
21
ovary
20
thyroid gland
20
vein
18
lymphatic vessel
18
skeleton
17
mouth
16
nerve
14
bronchus
13
bone marrow
12
pituitary gland
11
breast
9
vagina
8
tongue
8
urinary bladder
4
trachea
3
nose
1
pericardium
Project
116
AMP
5
ENCODE
Genome assembly (visualization)
114
hg19
49
GRCh38
2
hg18
annotation_type!
variant allelic effects
files.file_type!
tsv
month_released!
June, 2020
BIOSAMPLE
TYPE
121 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
histone modifications
binding sites
eQTL
gene expression
caQTL
tissue
liver
13
10
3
9
2
1
7
1
right lobe of liver
2
1
1
primary cell
hepatocyte
2
3
7
1
4
1
4
endothelial cell of hepatic sinusoid
6
6
hepatic stellate cell
2
1
2
1
1
cell line
HepG2
2
3
1
2
5
3
HuH-7
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
Download