Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
55
target gene predictions
45
binding sites
43
candidate regulatory elements
25
chromatin state
24
histone modifications
12
accessible chromatin
2
eQTL
Date released
70
February, 2021
69
September, 2022
28
February, 2024
19
October, 2022
12
June, 2020
4
May, 2021
2
August, 2017
2
August, 2021
Available data
181
bed bed3+
23
bed bed9
tsv
Organism
206
Homo sapiens
Biosample type
195
cell line
9
primary cell
2
tissue
Organ
594
epithelium
387
connective tissue
385
kidney
382
brain
354
musculature of body
309
lung
283
intestine
219
limb
218
heart
217
bodily fluid
206
blood
205
embryo
201
skin of body
190
pancreas
190
vasculature
172
large intestine
148
blood vessel
146
extraembryonic component
126
liver
115
stomach
105
eye
86
mammary gland
85
bone element
84
small intestine
81
uterus
76
prostate gland
73
placenta
71
adrenal gland
64
adipose tissue
64
penis
62
lymph node
61
ureter
55
artery
49
thymus
48
gonad
41
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
21
thyroid gland
21
vein
19
lymphatic vessel
18
mouth
18
skeleton
17
nerve
15
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
206
AMP
Genome assembly (visualization)
206
hg19
51
GRCh38
annotation_type!
variant allelic effects
files.file_type!
tsv
BIOSAMPLE
TYPE
206 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
binding sites
candidate regulatory elements
chromatin state
histone modifications
accessible chromatin
eQTL
cell line
K562
23
2
7
7
1
1
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
2
1
1
1
1
HAP-1
2
1
2
1
1
1
+ See 23 more…
primary cell
peripheral blood mononuclear cell
1
4
1
peripheral blood stem cell
1
1
1
tissue
blood
2
See all biosamples
Download