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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1669
candidate regulatory elements
1336
target gene predictions
972
histone modifications
841
accessible chromatin
810
binding sites
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2377
February, 2021
1640
September, 2022
329
November, 2021
284
May, 2021
280
June, 2020
236
February, 2024
96
October, 2022
72
May, 2020
64
January, 2020
56
January, 2021
52
August, 2021
44
March, 2020
39
May, 2024
34
August, 2017
19
April, 2020
19
November, 2022
15
May, 2022
12
November, 2019
9
October, 2019
6
February, 2023
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5703
bed bed3+
896
tsv
850
bed bed9
505
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
12
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5658
Homo sapiens
Biosample type
2109
cell line
1718
tissue
1536
primary cell
335
in vitro differentiated cells
4
stem cell
Organ
519
epithelium
323
connective tissue
299
brain
298
kidney
274
musculature of body
238
lung
225
intestine
190
bodily fluid
181
blood
178
embryo
167
limb
165
heart
164
skin of body
153
vasculature
148
pancreas
137
large intestine
116
blood vessel
112
extraembryonic component
100
liver
eye
91
stomach
76
uterus
72
mammary gland
70
bone element
64
small intestine
62
prostate gland
56
adrenal gland
56
placenta
54
lymph node
54
penis
48
ureter
46
adipose tissue
42
artery
38
thymus
37
gonad
31
esophagus
29
spinal cord
spleen
19
testis
18
lymphoid tissue
17
lymphatic vessel
17
ovary
17
vein
16
thyroid gland
15
skeleton
13
bronchus
mouth
12
nerve
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5295
AMP
329
ENCODE
59
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5695
hg19
832
GRCh38
1
hg18
annotation_type!
variant allelic effects
organ_slims!
eye
mouth
spleen
BIOSAMPLE
TYPE
5703 results
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table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 755 more…
tissue
stomach
40
21
1
3
heart
37
20
1
5
1
kidney
29
14
2
10
1
1
brain
29
16
3
2
1
lung
33
17
+ See 207 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
17
10
6
endothelial cell
3
7
1
15
2
2
1
+ See 314 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 100 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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