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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
10
accessible chromatin
6
binding sites
5
histone modifications
3
chromatin state
Date released
65
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
1
March, 2020
1
October, 2022
Available data
137
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
137
Homo sapiens
Biosample type
101
tissue
30
cell line
6
primary cell
Organ
519
epithelium
323
connective tissue
299
brain
298
kidney
274
musculature of body
238
lung
225
intestine
190
bodily fluid
181
blood
178
embryo
167
limb
165
heart
164
skin of body
153
vasculature
148
pancreas
137
large intestine
116
blood vessel
112
extraembryonic component
100
liver
96
eye
91
stomach
76
uterus
72
mammary gland
70
bone element
64
small intestine
62
prostate gland
56
adrenal gland
56
placenta
54
lymph node
penis
48
ureter
46
adipose tissue
42
artery
38
thymus
37
gonad
31
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
lymphatic vessel
17
ovary
17
vein
16
thyroid gland
15
skeleton
13
bronchus
13
mouth
12
nerve
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
131
AMP
6
ENCODE
Genome assembly (visualization)
137
hg19
8
GRCh38
annotation_type!
variant allelic effects
organ_slims!
penis
BIOSAMPLE
TYPE
137 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
tissue
large intestine
27
14
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
colonic mucosa
4
2
1
1
mucosa of rectum
4
2
1
+ See 4 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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