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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
96
candidate regulatory elements
59
target gene predictions
49
chromatin state
14
binding sites
12
histone modifications
3
accessible chromatin
3
eQTL
3
gene expression
variant allelic effects
Date released
137
September, 2022
75
February, 2021
June, 2020
7
May, 2021
6
November, 2021
3
August, 2017
3
February, 2024
3
January, 2022
3
March, 2024
1
March, 2020
1
October, 2022
Available data
187
bed bed3+
46
bed bed9
3
bigWig
3
tsv
Organism
239
Homo sapiens
Biosample type
145
tissue
79
cell line
15
primary cell
Organ
883
epithelium
621
kidney
428
brain
422
connective tissue
362
musculature of body
304
lung
276
intestine
262
pancreas
245
vasculature
240
heart
230
limb
206
bodily fluid
205
embryo
195
blood
195
skin of body
191
blood vessel
167
large intestine
146
liver
140
extraembryonic component
114
stomach
101
eye
84
bone element
83
adipose tissue
83
small intestine
82
mammary gland
81
uterus
72
prostate gland
71
adrenal gland
71
placenta
68
artery
61
penis
60
ureter
54
lymph node
48
thymus
46
gonad
41
esophagus
41
spinal cord
33
spleen
24
testis
22
lymphoid tissue
22
nerve
22
ovary
21
thyroid gland
21
vein
20
lymphatic vessel
18
mouth
18
skeleton
14
bronchus
13
bone marrow
13
pituitary gland
12
breast
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
233
AMP
6
ENCODE
Genome assembly (visualization)
233
hg19
57
GRCh38
annotation_type!
variant allelic effects
month_released!
June, 2020
September, 2018
BIOSAMPLE
TYPE
239 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
tissue
large intestine
27
14
13
1
sigmoid colon
10
7
5
transverse colon
8
5
4
1
prostate gland
4
2
2
2
2
1
colonic mucosa
4
2
3
1
+ See 9 more…
cell line
22Rv1
4
2
2
1
1
HT-29
2
2
1
1
1
LNCaP clone FGC
3
2
2
HCT116
2
3
1
PC-3
2
1
1
1
1
+ See 13 more…
primary cell
epithelial cell of prostate
4
3
2
colon epithelial cell
3
3
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