Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
accessible chromatin
24
gene expression
13
binding sites
11
candidate regulatory elements
10
histone modifications
8
eQTL
7
target gene predictions
4
differential activity
variant allelic effects
3
Fine-mapped variants
3
chromatin state
1
caQTL
Date released
September, 2022
28
February, 2024
26
February, 2021
10
August, 2021
10
March, 2020
5
June, 2020
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2021
2
February, 2020
2
May, 2022
2
May, 2024
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
68
bed bed3+
28
tsv
23
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
108
Homo sapiens
Biosample type
55
primary cell
34
tissue
15
cell line
4
in vitro differentiated cells
Organ
767
epithelium
411
kidney
332
connective tissue
269
brain
222
pancreas
179
vasculature
164
musculature of body
143
bodily fluid
139
heart
138
blood
135
blood vessel
134
embryo
122
intestine
108
liver
101
skin of body
100
lung
98
limb
80
eye
76
large intestine
71
uterus
62
adipose tissue
50
artery
48
stomach
47
bone element
47
extraembryonic component
44
mammary gland
38
lymph node
38
prostate gland
34
penis
30
adrenal gland
27
small intestine
26
gonad
25
placenta
22
esophagus
22
ureter
19
spinal cord
18
lymphatic vessel
16
spleen
16
thymus
16
vein
14
nerve
14
testis
13
pituitary gland
11
ovary
10
bone marrow
thyroid gland
9
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
103
AMP
5
ENCODE
Genome assembly (visualization)
77
hg19
44
GRCh38
2
hg18
annotation_type!
variant allelic effects
month_released!
September, 2022
organ_slims!
thyroid gland
BIOSAMPLE
TYPE
108 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
binding sites
candidate regulatory elements
histone modifications
eQTL
target gene predictions
differential activity
Fine-mapped variants
chromatin state
caQTL
primary cell
hepatocyte
8
13
1
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
1
1
1
pancreatic endothelial cell
1
3
tissue
liver
4
1
1
6
2
7
3
1
2
1
right lobe of liver
1
1
1
3
cell line
HepG2
2
3
1
1
2
1
HuH-7
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte(AFP)
3
hepatocyte
1
Download