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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
267
gene expression
220
accessible chromatin
139
target gene predictions
137
candidate regulatory elements
94
differential activity
67
chromatin state
45
binding sites
variant allelic effects
29
histone modifications
17
eQTL
6
Fine-mapped variants
2
caQTL
Date released
222
February, 2021
187
September, 2022
155
September, 2023
127
November, 2021
52
February, 2024
38
March, 2023
37
May, 2021
29
August, 2021
27
June, 2020
20
January, 2021
18
January, 2020
16
November, 2022
14
February, 2020
14
March, 2020
12
February, 2023
10
May, 2024
7
April, 2020
6
August, 2018
6
October, 2022
5
August, 2017
5
October, 2019
4
January, 2022
3
March, 2024
2
May, 2022
2
September, 2018
1
January, 2018
1
July, 2020
1
May, 2020
1
November, 2019
Available data
578
bed bed3+
347
tsv
177
bigWig
78
txt
62
bed bed9
10
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
1023
Homo sapiens
Biosample type
795
primary cell
153
tissue
48
cell line
27
in vitro differentiated cells
Organ
918
epithelium
636
kidney
452
connective tissue
449
brain
368
musculature of body
310
lung
286
intestine
266
pancreas
254
vasculature
247
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
154
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphatic vessel
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
712
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
655
hg19
272
GRCh38
2
hg18
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
1023 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
3
2
1
1
2
hepatocyte
13
8
3
2
1
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
glomerular endothelial cell
14
2
1
2
1
endothelial cell of umbilical vein
2
4
6
5
2
+ See 142 more…
tissue
adipose tissue
3
2
8
7
6
1
4
pigmented layer of retina
20
subcutaneous adipose tissue
5
2
2
1
1
6
3
omental fat pad
2
2
2
5
2
2
3
breast epithelium
1
3
5
2
+ See 24 more…
cell line
EndoC_BH1
8
8
1
3
ACC112
1
2
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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