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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
309
accessible chromatin
303
gene expression
302
candidate regulatory elements
272
target gene predictions
168
chromatin state
106
differential activity
83
binding sites
59
histone modifications
variant allelic effects
25
eQTL
6
Fine-mapped variants
4
caQTL
2
pQTL
Date released
469
September, 2022
373
February, 2021
178
November, 2021
172
September, 2023
61
February, 2024
53
May, 2021
51
June, 2020
45
March, 2023
34
August, 2021
24
January, 2020
24
January, 2021
22
November, 2022
20
October, 2022
18
February, 2020
16
March, 2020
13
February, 2023
11
April, 2020
10
August, 2017
7
August, 2018
7
January, 2022
7
October, 2019
6
May, 2022
3
March, 2024
3
May, 2020
3
November, 2020
2
May, 2024
2
September, 2018
1
January, 2018
1
July, 2020
1
June, 2021
1
November, 2019
Available data
1042
bed bed3+
390
tsv
230
bigWig
157
bed bed9
85
txt
11
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
1
bed bed9+
Organism
1639
Homo sapiens
Biosample type
1062
primary cell
334
tissue
168
cell line
74
in vitro differentiated cells
1
stem cell
Organ
908
epithelium
636
kidney
449
brain
444
connective tissue
368
musculature of body
310
lung
286
intestine
266
pancreas
251
vasculature
245
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1248
AMP
178
ENCODE
170
KPMP
24
T1D
11
LungMap
4
ITG
4
community
Genome assembly (visualization)
1219
hg19
424
GRCh38
2
hg18
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
1639 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
target gene predictions
chromatin state
differential activity
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
endothelial cell
15
9
7
2
1
1
2
hepatocyte
8
13
1
3
1
1
4
fibroblast
16
4
1
2
epithelial cell of proximal tubule
1
16
2
1
1
1
pericyte cell
10
1
10
1
+ See 194 more…
tissue
lung
1
33
17
16
1
left lung
26
13
13
right lung
1
22
11
11
adipose tissue
2
3
7
8
6
1
4
pigmented layer of retina
20
+ See 29 more…
cell line
A549
1
21
19
18
2
1
EndoC_BH1
8
8
1
3
IMR-90
1
2
2
1
2
1
PC-9
1
2
2
1
1
1
GM23248
1
2
1
1
1
1
+ See 26 more…
in vitro differentiated cells
adipocyte
4
1
4
6
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
retinal pigment epithelial cell
6
chondrocyte
5
hepatocyte
2
1
1
+ See 15 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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