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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
120
candidate regulatory elements
106
target gene predictions
87
accessible chromatin
69
chromatin state
54
gene expression
33
differential activity
21
eQTL
variant allelic effects
14
Fine-mapped variants
11
histone modifications
9
binding sites
2
sQTL
2
variant to gene
Date released
185
September, 2022
94
February, 2021
47
March, 2023
46
May, 2021
22
January, 2021
19
February, 2024
19
November, 2021
18
March, 2020
11
January, 2020
10
June, 2020
8
August, 2021
8
February, 2020
7
August, 2018
7
January, 2022
6
October, 2019
5
May, 2020
4
November, 2019
3
August, 2017
2
March, 2024
2
May, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2022
Available data
337
bed bed3+
94
tsv
69
bigWig
64
bed bed9
10
bigBed narrowPeak
6
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
1
bed bed9+
Organism
528
Homo sapiens
Biosample type
342
tissue
133
primary cell
50
cell line
3
in vitro differentiated cells
Organ
908
epithelium
636
kidney
449
brain
444
connective tissue
368
musculature of body
310
lung
286
intestine
266
pancreas
251
vasculature
245
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
485
AMP
22
T1D
19
ENCODE
2
community
Genome assembly (visualization)
428
hg19
142
GRCh38
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
528 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
eQTL
Fine-mapped variants
histone modifications
binding sites
sQTL
variant to gene
tissue
muscle of arm
33
16
1
16
muscle of leg
27
14
2
15
islet of Langerhans
1
6
3
11
13
2
1
2
2
2
body of pancreas
8
5
4
2
1
3
tibial nerve
6
3
3
4
2
2
3
+ See 30 more…
primary cell
pancreatic ductal cell
3
6
3
3
2
1
pancreatic beta cell
3
8
3
3
pancreatic alpha cell
3
7
3
3
pancreatic acinar cell
3
6
3
3
pancreatic delta cell
4
5
3
3
+ See 18 more…
cell line
EndoC_BH1
1
8
8
3
pituitary stalk
10
GM23248
2
1
1
1
1
1
Panc1
2
2
1
8988T
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
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