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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 343target gene predictions
  • 193accessible chromatin
  • 111candidate regulatory elements
  • 72chromatin state
  • 48histone modifications
  • 36Fine-mapped variants
  • 29eQTL
  • 19gene expression
  • 18differential activity
  • variant allelic effects
  • 16binding sites
Date released
  • 418July, 2026
  • 180September, 2022
  • 110February, 2021
  • 38March, 2020
  • 29January, 2020
  • 21June, 2020
  • 18February, 2020
  • 18January, 2022
  • 18May, 2026
  • 11May, 2021
  • 6August, 2017
  • 6October, 2022
  • 4May, 2019
  • 3September, 2023
  • 2May, 2020
  • 1February, 2024
  • 1March, 2024
  • 1November, 2019
Available data
  • 734bed bed3+
  • 67tsv
  • 66bed bed9
  • 21bigWig
  • 6bigBed bed9
Organism
  • 884Homo sapiens
Collection Tags
  • 249ENCODE-rE2G
  • 180EpiMap
  • 133CATlas
  • 79ChIP-Atlas
  • 62ENCODE
  • 61GTEx
  • 36HDMA
  • 18pyxis
  • 17T1D
  • 17T2D
  • 17eQTLCatalogue
  • 15DGA
  • 5AMP
Biosample type
  • 558tissue
  • 224primary cell
  • 90cell line
  • 12in vitro differentiated cells
  • 1stem cell
Organ
  • 3365blood
  • 2887vasculature
  • 2853bodily fluid
  • 2852blood vessel
  • 2658vein
  • 911epithelium
  • 885brain
  • 740kidney
  • 502connective tissue
  • 478heart
  • 439lung
  • 379musculature of body
  • 355intestine
  • 308pancreas
  • 295skin of body
  • 236limb
  • 236liver
  • 226large intestine
  • 215embryo
  • 174extraembryonic component
  • 159eye
  • 139adipose tissue
  • 138stomach
  • 111muscle organ
  • 104bone element
  • 103mammary gland
  • 101adrenal gland
  • 97placenta
  • 97small intestine
  • 93thymus
  • 93uterus
  • 86prostate gland
  • 84artery
  • 70ureter
  • 64gonad
  • 64penis
  • 63spleen
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 46esophagus
  • 46thyroid gland
  • 32ovary
  • 31testis
  • 24lymphoid tissue
  • 23nerve
  • 22skeleton
  • 21lymphatic vessel
  • 21mouth
  • 15breast
  • 15bronchus
  • 13bone marrow
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 885AMP
Genome assembly (visualization)
  • 570GRCh38
  • 413hg19
annotation_type!
  • variant allelic effects
BIOSAMPLE
TYPE

885 results

search-icontable-tab-icon
Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
chromatin state
histone modifications
Fine-mapped variants
eQTL
gene expression
differential activity
binding sites
tissue
brain30229183211
head of caudate nucleus86
dorsolateral prefrontal cortex5711
posterior cingulate gyrus48
caudate nucleus42541321
primary cell
glutamatergic neuron815
GABAergic neuron22
astrocyte182
medium spiny neuron8
neuron8
cell line
SK-N-DZ41421
SK-N-SH5421
pituitary stalk10
SK-N-MC212112
BE(2)-C111112
in vitro differentiated cells
brain2
hippocampal neuron11
ESC dervived hypothalamic neuron (arcuate nucleus)1
ESC dervived hypothalamic progenitor (arcuate nucleus)1
astrocyte1
stem cell
undifferentiated ESC (H9 cell line)1
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