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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
102
target gene predictions
78
candidate regulatory elements
40
chromatin state
13
accessible chromatin
10
binding sites
7
histone modifications
4
gene expression
3
eQTL
Date released
110
September, 2022
56
February, 2021
54
February, 2024
9
June, 2020
8
November, 2021
7
May, 2021
4
March, 2024
3
August, 2017
3
January, 2022
2
October, 2022
1
March, 2020
Available data
213
bed bed3+
37
bed bed9
4
bigWig
4
tsv
Organism
257
Homo sapiens
Biosample type
147
tissue
99
cell line
11
primary cell
Organ
908
epithelium
636
kidney
448
brain
444
connective tissue
368
musculature of body
310
lung
286
intestine
266
pancreas
251
vasculature
245
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
249
AMP
8
ENCODE
Genome assembly (visualization)
250
hg19
101
GRCh38
annotation_type!
variant allelic effects
organ_slims!
skeleton
BIOSAMPLE
TYPE
257 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
tissue
large intestine
14
27
13
1
1
sigmoid colon
7
10
5
1
transverse colon
5
8
4
1
1
colonic mucosa
2
4
3
1
mucosa of rectum
2
4
3
+ See 11 more…
cell line
HeLa-S3
55
5
3
1
HT-29
2
2
1
1
1
1
SW480
1
2
1
1
1
1
HCT116
3
2
1
HCT-116 cell
1
1
2
+ See 5 more…
primary cell
colon epithelial cell
3
3
Ishikawa
1
1
1
uterine smooth muscle cell
1
1
See all biosamples
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