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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
29
candidate regulatory elements
22
target gene predictions
19
chromatin state
11
accessible chromatin
10
histone modifications
9
eQTL
6
binding sites
4
gene expression
3
Fine-mapped variants
1
caQTL
1
differential activity
variant allelic effects
Date released
52
September, 2022
24
February, 2021
7
August, 2021
6
March, 2020
5
June, 2020
3
August, 2017
3
May, 2021
2
February, 2020
2
January, 2020
2
January, 2022
2
May, 2022
1
February, 2024
1
March, 2024
1
May, 2024
1
November, 2019
1
November, 2021
1
October, 2022
1
September, 2018
Available data
81
bed bed3+
16
bed bed9
9
tsv
5
bigWig
1
bam
1
bigBed bed9
Organism
115
Homo sapiens
Biosample type
78
tissue
28
cell line
9
primary cell
Organ
epithelium
636
kidney
452
connective tissue
449
brain
368
musculature of body
310
lung
286
intestine
266
pancreas
254
vasculature
247
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
154
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
lymphatic vessel
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
114
AMP
1
ENCODE
Genome assembly (visualization)
106
hg19
32
GRCh38
2
hg18
annotation_type!
variant allelic effects
organ_slims!
epithelium
lymphatic vessel
BIOSAMPLE
TYPE
115 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
eQTL
binding sites
gene expression
Fine-mapped variants
caQTL
differential activity
tissue
liver
13
10
9
4
2
7
1
1
1
1
thyroid gland
8
5
4
1
1
right lobe of liver
2
1
1
1
1
3
thyroid
1
cell line
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
primary cell
hepatic stellate cell
2
1
1
3
1
1
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