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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1107target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • 817binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2638February, 2025
  • 2589February, 2021
  • 2511September, 2022
  • 322February, 2024
  • 289June, 2020
  • 286September, 2023
  • 250May, 2021
  • 222November, 2021
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 98October, 2022
  • 89January, 2020
  • 76May, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 31February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5710bed bed3+
  • 3576tsv
  • 869bed bed9
  • 542bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 12bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 10230Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 964ENCODE
  • 422AMP
  • 421T1D
  • 375DGA
  • 291T2DKP
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 151GTEx
  • 141 T2DKP
  • 111T2D
  • 101eQTLCatalogue
  • 97CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5246tissue
  • 2300cell line
  • 2279primary cell
  • 447in vitro differentiated cells
  • 4stem cell
Organ
  • 2894vasculature
  • 2855bodily fluid
  • 2844blood
  • 2836blood vessel
  • 2656vein
  • 858epithelium
  • 636kidney
  • 438brain
  • 433connective tissue
  • 364musculature of body
  • 303lung
  • 272intestine
  • 252pancreas
  • 240heart
  • 233limb
  • 210embryo
  • 193skin of body
  • 166large intestine
  • 155liver
  • 143extraembryonic component
  • 111stomach
  • 107eye
  • 93adipose tissue
  • 89bone element
  • 81mammary gland
  • 81small intestine
  • 80uterus
  • 75prostate gland
  • 73artery
  • 72placenta
  • 66adrenal gland
  • 63penis
  • 61lymph node
  • 61ureter
  • 48gonad
  • 48thymus
  • 42spinal cord
  • 41esophagus
  • 33spleen
  • 26testis
  • 24lymphoid tissue
  • 23lymphatic vessel
  • 23nerve
  • 21ovary
  • 20thyroid gland
  • 19mouth
  • 18skeleton
  • 14bronchus
  • 13bone marrow
  • 12breast
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1pericardium
Project
  • 9678AMP
  • 281KPMP
  • 222ENCODE
  • 59T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6628hg19
  • 1798GRCh38
  • 4hg18
annotation_type!
  • variant allelic effects
software_used.software.name!
  • abc
BIOSAMPLE
TYPE

10277 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
accessible chromatin
binding sites
gene expression
eQTL
differential activity
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart3720121513
stomach4019119311
kidney291421610171
brain29163182112
cell line
HeLa-S355431
A549211811812
H1-hESC13811128
K5627221712
MCF-7952513
primary cell
monocyte286181154121
common myeloid progenitor, CD34-positive271313
CD8-positive, alpha-beta T cell7230143
B cell179862
endothelial cell311152912
in vitro differentiated cells
neural progenitor cell55154107
hematopoietic multipotent progenitor cell1910110111
adipocyte4216411
embryonic stem cell11561
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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