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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
21
gene expression
20
accessible chromatin
17
candidate regulatory elements
15
target gene predictions
12
chromatin state
8
binding sites
8
eQTL
7
histone modifications
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
Date released
30
September, 2022
26
February, 2024
17
February, 2021
9
August, 2021
9
March, 2020
5
November, 2021
4
March, 2023
3
January, 2020
3
June, 2020
3
May, 2020
2
August, 2017
2
February, 2020
2
May, 2021
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
71
bed bed3+
25
tsv
22
bigWig
10
bed bed9
1
bam
1
bigBed bed9
Organism
119
Homo sapiens
Biosample type
63
primary cell
56
tissue
cell line
in vitro differentiated cells
Organ
878
epithelium
610
kidney
385
brain
376
connective tissue
353
musculature of body
255
intestine
253
vasculature
245
heart
238
pancreas
237
limb
215
lung
198
blood vessel
140
large intestine
138
extraembryonic component
125
skin of body
119
liver
119
stomach
93
eye
85
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
58
embryo
49
thymus
48
mammary gland
45
esophagus
43
gonad
43
penis
40
spinal cord
35
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
21
vein
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
17
lymphatic vessel
16
bronchus
15
mouth
13
bodily fluid
13
breast
12
blood
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
3
pituitary gland
1
pericardium
Project
114
AMP
5
ENCODE
Genome assembly (visualization)
91
hg19
51
GRCh38
1
hg18
annotation_type!
variant to gene
biosample_type!
cell line
in vitro differentiated cells
month_released!
May, 2022
BIOSAMPLE
TYPE
119 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
eQTL
histone modifications
differential activity
variant allelic effects
Fine-mapped variants
primary cell
hepatocyte
13
8
1
3
1
1
4
2
endothelial cell of hepatic sinusoid
4
6
6
hepatic stellate cell
1
3
1
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
1
3
13
10
9
1
7
2
1
right lobe of liver
1
2
1
1
1
3
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