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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1630
candidate regulatory elements
1301
target gene predictions
970
histone modifications
875
accessible chromatin
812
binding sites
114
variant allelic effects
35
chromatin state
11
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
variant to gene
1
sQTL
Date released
2359
February, 2021
1598
September, 2022
321
November, 2021
288
February, 2024
282
June, 2020
281
May, 2021
125
May, 2020
101
October, 2022
57
January, 2020
56
January, 2021
52
August, 2021
41
November, 2022
38
March, 2020
37
May, 2024
34
August, 2017
28
February, 2023
19
April, 2020
15
May, 2022
10
November, 2019
8
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
June, 2021
Available data
5768
bed bed3+
868
tsv
819
bed bed9
523
bigWig
108
txt
34
bed bed9+
30
bigBed bed9
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5722
Homo sapiens
Biosample type
2117
cell line
1692
tissue
1606
primary cell
347
in vitro differentiated cells
4
stem cell
Organ
557
epithelium
338
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
heart
175
limb
166
vasculature
165
skin of body
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
103
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
lymphatic vessel
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5367
AMP
321
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5762
hg19
803
GRCh38
1
hg18
annotation_type!
variant to gene
organ_slims!
heart
ovary
BIOSAMPLE
TYPE
5768 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 758 more…
tissue
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
lung
33
17
+ See 206 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
17
10
6
endothelial cell
3
7
1
15
2
2
2
1
+ See 323 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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