Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1610
candidate regulatory elements
1289
target gene predictions
966
histone modifications
880
accessible chromatin
878
chromatin state
800
binding sites
662
gene expression
167
differential activity
165
eQTL
129
variant allelic effects
65
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
783
September, 2022
63
March, 2020
34
August, 2017
34
May, 2022
8
May, 2019
5
January, 2020
5
May, 2021
4
October, 2019
2
April, 2019
2
March, 2023
2
May, 2020
1
November, 2019
Available data
809
bed bed9
63
tsv
34
bed bed3+
34
bed bed9+
30
bigBed bed9
1
bam
1
bigWig
Organism
943
Homo sapiens
Biosample type
528
tissue
186
primary cell
184
cell line
44
in vitro differentiated cells
1
stem cell
Organ
108
brain
80
musculature of body
77
kidney
71
lung
heart
59
intestine
59
limb
54
connective tissue
53
epithelium
42
vasculature
37
blood vessel
36
large intestine
35
skin of body
33
extraembryonic component
28
embryo
27
bodily fluid
25
blood
24
stomach
22
pancreas
20
liver
20
small intestine
16
adipose tissue
16
placenta
15
bone element
mammary gland
14
adrenal gland
14
artery
13
prostate gland
13
ureter
11
spinal cord
11
thymus
10
penis
9
eye
8
gonad
8
lymph node
7
esophagus
7
nerve
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
943
AMP
Genome assembly (visualization)
941
hg19
867
GRCh38
organ_slims!
heart
mammary gland
BIOSAMPLE
TYPE
943 results
search-icon
table-tab-icon
Clear Filters
chromatin state
Fine-mapped variants
tissue
stomach
19
brain
18
kidney
16
lung
16
muscle of arm
16
+ See 110 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 77 more…
cell line
A549
18
K562
7
HeLa-S3
3
endometrium adenocarcinoma
3
immortal human breast epithelial cell line cell
3
+ See 141 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 15 more…
stem cell
H1-hESC
1
See all biosamples
Download