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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1499
candidate regulatory elements
1228
target gene predictions
926
histone modifications
849
accessible chromatin
817
chromatin state
796
binding sites
658
gene expression
167
differential activity
137
eQTL
114
variant allelic effects
29
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
representative DNase hypersensitivity sites
Date released
261
June, 2020
222
November, 2021
51
May, 2020
49
February, 2024
44
November, 2022
41
January, 2020
30
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
10
November, 2019
9
October, 2019
6
September, 2022
5
February, 2021
3
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
839
bed bed3+
492
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
804
Homo sapiens
Biosample type
473
primary cell
155
tissue
153
cell line
68
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
579
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
841
hg19
356
GRCh38
annotation_type!
representative DNase hypersensitivity sites
organ_slims!
brain
limb
vein
BIOSAMPLE
TYPE
849 results
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table-tab-icon
Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 209 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 67 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 138 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
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