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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1710
candidate regulatory elements
1218
target gene predictions
977
histone modifications
944
chromatin state
817
binding sites
643
accessible chromatin
512
gene expression
166
eQTL
139
variant allelic effects
74
Fine-mapped variants
48
differential activity
11
caQTL
5
hQTL
5
sQTL
3
meQTL
3
other
3
variant to gene
1
pQTL
1
representative DNase hypersensitivity sites
Date released
729
February, 2021
289
June, 2020
91
October, 2022
65
January, 2020
54
February, 2024
54
May, 2020
44
November, 2022
31
August, 2021
26
May, 2021
25
February, 2023
14
May, 2022
12
November, 2019
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
1
March, 2020
Available data
1450
bed bed3+
259
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1415
Homo sapiens
Biosample type
806
cell line
314
primary cell
233
tissue
107
in vitro differentiated cells
Organ
160
epithelium
83
connective tissue
61
eye
58
bodily fluid
58
brain
57
blood
54
kidney
49
pancreas
49
vasculature
37
blood vessel
33
liver
26
musculature of body
26
skin of body
25
heart
23
embryo
22
limb
21
bone element
20
lymph node
17
artery
16
intestine
16
mammary gland
15
lung
13
large intestine
13
prostate gland
10
penis
9
adipose tissue
9
extraembryonic component
8
skeleton
7
gonad
6
uterus
5
placenta
5
testis
5
vein
4
spinal cord
4
ureter
3
bronchus
3
lymphatic vessel
3
nerve
3
spleen
3
stomach
3
trachea
2
bone marrow
2
esophagus
2
lymphoid tissue
2
thymus
1
adrenal gland
1
breast
1
mouth
1
nose
1
ovary
1
small intestine
1
thyroid gland
1
tongue
1
urinary bladder
Project
1460
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
1451
hg19
175
GRCh38
1
hg18
month_released!
August, 2022
BIOSAMPLE
TYPE
1460 results
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Clear Filters
binding sites
accessible chromatin
cell line
EndoC_BH1
1
8
breast cancer cell
9
fibroblast cell line
6
1
melanoma
7
HepG2
3
2
+ See 541 more…
primary cell
monocyte
1
17
endothelial cell of hepatic sinusoid
6
4
hepatocyte
1
7
osteoblast
3
5
endothelial cell
2
4
+ See 154 more…
tissue
retina
1
23
pigmented layer of retina
20
kidney
1
10
islet of Langerhans
2
6
heart
1
5
+ See 111 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
1
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
adipocyte
1
4
+ See 51 more…
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