Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
484
accessible chromatin
478
gene expression
371
target gene predictions
328
candidate regulatory elements
210
histone modifications
197
chromatin state
152
differential activity
100
binding sites
81
variant allelic effects
46
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
222
November, 2021
72
February, 2021
53
June, 2020
47
May, 2020
37
February, 2024
28
January, 2021
23
October, 2022
21
January, 2020
19
April, 2020
13
August, 2021
13
May, 2021
13
May, 2022
9
November, 2022
5
October, 2019
5
September, 2022
2
November, 2020
1
January, 2022
1
June, 2021
Available data
581
bed bed3+
394
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
539
Homo sapiens
Biosample type
cell line
584
primary cell
213
tissue
107
in vitro differentiated cells
Organ
189
epithelium
83
connective tissue
41
vasculature
38
pancreas
31
blood vessel
24
kidney
24
liver
22
musculature of body
13
skin of body
12
mammary gland
11
brain
11
intestine
11
lung
9
artery
9
eye
8
extraembryonic component
8
heart
6
adrenal gland
5
bronchus
5
embryo
5
penis
5
placenta
5
stomach
4
bone element
4
bone marrow
4
vein
3
blood
3
bodily fluid
3
large intestine
3
lymphatic vessel
3
trachea
3
uterus
2
esophagus
2
gonad
2
small intestine
1
ovary
1
thymus
1
thyroid gland
Project
314
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
583
hg19
288
GRCh38
biosample_type!
cell line
organ_slims!
limb
BIOSAMPLE
TYPE
584 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
binding sites
primary cell
monocyte
18
1
endothelial cell
15
2
fibroblast
16
1
endothelial cell of hepatic sinusoid
6
6
excitatory neuron
12
+ See 246 more…
See all biosamples
Download