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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1700
candidate regulatory elements
1349
target gene predictions
972
histone modifications
936
chromatin state
902
accessible chromatin
811
binding sites
675
gene expression
166
eQTL
165
differential activity
136
variant allelic effects
68
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
286
June, 2020
222
November, 2021
63
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
27
February, 2023
26
May, 2021
19
April, 2020
15
May, 2022
10
February, 2021
10
November, 2019
9
October, 2019
7
October, 2022
4
January, 2022
4
September, 2022
3
September, 2018
2
March, 2023
2
November, 2020
1
August, 2020
1
August, 2022
1
June, 2021
Available data
905
bed bed3+
520
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
tsv
Organism
872
Homo sapiens
Biosample type
490
primary cell
196
tissue
162
cell line
69
in vitro differentiated cells
Organ
214
epithelium
90
connective tissue
67
pancreas
59
eye
50
kidney
42
brain
39
vasculature
29
blood vessel
29
musculature of body
28
heart
25
liver
21
intestine
20
limb
15
bone element
15
lung
artery
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
645
AMP
222
ENCODE
31
T1D
19
LungMap
Genome assembly (visualization)
902
hg19
391
GRCh38
organ_slims!
artery
BIOSAMPLE
TYPE
917 results
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Clear Filters
accessible chromatin
caQTL
variant to gene
primary cell
monocyte
18
endothelial cell
15
2
fibroblast
16
macrophage
12
1
excitatory neuron
12
+ See 215 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
2
heart
5
+ See 94 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 147 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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