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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1544
candidate regulatory elements
1259
target gene predictions
969
histone modifications
867
accessible chromatin
843
chromatin state
810
binding sites
657
gene expression
167
differential activity
160
eQTL
122
variant allelic effects
56
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
278
June, 2020
216
November, 2021
54
May, 2020
50
January, 2020
49
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
27
February, 2023
26
May, 2021
19
April, 2020
15
May, 2022
8
October, 2019
7
November, 2019
7
October, 2022
6
September, 2022
4
February, 2021
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
868
bed bed3+
493
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
833
Homo sapiens
Biosample type
488
primary cell
162
tissue
159
cell line
69
in vitro differentiated cells
Organ
214
epithelium
90
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
39
vasculature
29
blood vessel
29
musculature of body
heart
25
liver
21
intestine
limb
15
bone element
15
lung
13
artery
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
612
AMP
216
ENCODE
31
T1D
19
LungMap
Genome assembly (visualization)
865
hg19
362
GRCh38
organ_slims!
heart
limb
BIOSAMPLE
TYPE
878 results
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Clear Filters
accessible chromatin
caQTL
primary cell
monocyte
18
endothelial cell
15
2
fibroblast
16
macrophage
12
1
excitatory neuron
12
+ See 214 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
liver
4
1
+ See 74 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
786-O cell
1
A-673 cell
1
+ See 145 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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