Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1582
candidate regulatory elements
1271
target gene predictions
929
histone modifications
867
accessible chromatin
865
chromatin state
801
binding sites
662
gene expression
167
differential activity
139
eQTL
121
variant allelic effects
38
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
787
February, 2021
771
September, 2022
266
June, 2020
220
November, 2021
52
May, 2020
51
February, 2024
47
January, 2020
44
November, 2022
39
May, 2024
30
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
9
October, 2019
3
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
2439
bed bed3+
505
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
2404
Homo sapiens
Biosample type
1013
tissue
829
primary cell
460
cell line
147
in vitro differentiated cells
Organ
322
epithelium
209
kidney
176
connective tissue
173
musculature of body
brain
146
lung
134
intestine
114
limb
98
heart
89
pancreas
89
vasculature
88
skin of body
79
large intestine
77
eye
69
embryo
68
extraembryonic component
65
blood vessel
59
bodily fluid
59
stomach
55
blood
49
liver
40
bone element
40
small intestine
35
adrenal gland
35
mammary gland
35
ureter
33
placenta
32
prostate gland
31
penis
29
lymph node
26
adipose tissue
22
gonad
22
thymus
21
artery
esophagus
18
spinal cord
17
spleen
12
skeleton
12
uterus
11
lymphatic vessel
11
lymphoid tissue
11
testis
10
ovary
10
thyroid gland
9
mouth
9
nerve
8
vein
7
bronchus
6
breast
5
tongue
4
bone marrow
4
urinary bladder
4
vagina
2
nose
1
trachea
Project
2181
AMP
220
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
2441
hg19
408
GRCh38
organ_slims!
brain
esophagus
BIOSAMPLE
TYPE
2449 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
tissue
stomach
40
3
heart
37
5
kidney
29
10
muscle of arm
33
1
lung
33
+ See 118 more…
primary cell
common myeloid progenitor, CD34-positive
27
B cell
17
6
fibroblast
3
16
endothelial cell
3
15
monocyte
18
+ See 251 more…
cell line
A549
21
1
MCF-7
9
1
EndoC_BH1
8
K562
7
1
H9
7
+ See 240 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
1
neural progenitor cell
5
10
adipocyte
4
4
embryonic stem cell
6
retinal pigment epithelial cell
6
+ See 48 more…
See all biosamples
Download