Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
1258
target gene predictions
878
histone modifications
868
chromatin state
835
accessible chromatin
776
binding sites
609
gene expression
170
eQTL
167
differential activity
134
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
Date released
772
September, 2022
262
June, 2020
219
November, 2021
68
January, 2020
57
May, 2020
49
February, 2024
48
May, 2022
31
August, 2017
28
January, 2021
26
November, 2022
25
February, 2023
21
May, 2021
20
August, 2021
19
April, 2020
12
October, 2019
11
February, 2021
11
November, 2019
9
May, 2019
8
April, 2019
3
September, 2018
2
November, 2020
1
January, 2022
1
June, 2021
Available data
868
bed bed3+
797
bed bed9
515
bigWig
35
bigBed bed9
34
bed bed9+
9
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
1658
Homo sapiens
Biosample type
682
tissue
667
primary cell
353
cell line
in vitro differentiated cells
1
stem cell
Organ
255
epithelium
126
kidney
116
connective tissue
113
brain
101
musculature of body
86
lung
82
pancreas
80
intestine
77
heart
70
limb
68
vasculature
62
eye
54
blood vessel
46
large intestine
44
skin of body
extraembryonic component
40
liver
39
bodily fluid
37
blood
34
embryo
32
stomach
30
bone element
23
small intestine
21
adrenal gland
21
mammary gland
20
placenta
19
artery
18
prostate gland
17
adipose tissue
17
ureter
16
lymph node
13
gonad
13
thymus
11
esophagus
11
penis
11
skeleton
10
spinal cord
8
spleen
7
lymphoid tissue
7
nerve
7
uterus
7
vein
6
ovary
6
testis
6
thyroid gland
5
bronchus
5
lymphatic vessel
5
mouth
4
bone marrow
3
breast
3
tongue
3
urinary bladder
2
vagina
1
trachea
Project
1436
AMP
219
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
1702
hg19
1174
GRCh38
annotation_type!
candidate regulatory elements
biosample_type!
in vitro differentiated cells
organ_slims!
extraembryonic component
BIOSAMPLE
TYPE
1703 results
search-icon
table-tab-icon
Clear Filters
chromatin state
accessible chromatin
tissue
heart
21
5
kidney
16
10
retina
3
23
stomach
19
3
brain
18
2
+ See 131 more…
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
B cell
8
6
common myeloid progenitor, CD34-positive
13
+ See 245 more…
cell line
A549
18
1
EndoC_BH1
8
K562
7
1
MCF-7
5
1
HepG2
2
2
+ See 226 more…
stem cell
H1-hESC
1
See all biosamples
Download