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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1624
candidate regulatory elements
1299
target gene predictions
953
histone modifications
916
chromatin state
849
accessible chromatin
772
binding sites
682
gene expression
169
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
277
June, 2020
222
November, 2021
110
September, 2023
65
January, 2020
54
February, 2024
54
May, 2020
51
March, 2023
November, 2022
30
August, 2021
28
January, 2021
26
February, 2023
26
May, 2021
19
April, 2020
14
May, 2022
12
November, 2019
9
October, 2019
6
September, 2022
4
January, 2022
3
February, 2021
3
September, 2018
2
November, 2020
1
June, 2021
Available data
842
bed bed3+
509
bigWig
158
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
971
Homo sapiens
Biosample type
626
primary cell
177
tissue
162
cell line
51
in vitro differentiated cells
Organ
289
epithelium
106
kidney
98
pancreas
95
connective tissue
54
vasculature
42
brain
38
blood vessel
37
eye
28
liver
28
musculature of body
26
heart
21
intestine
20
limb
15
bone element
15
lung
13
artery
13
skin of body
blood
12
bodily fluid
12
embryo
10
large intestine
9
extraembryonic component
8
adipose tissue
8
lymph node
skeleton
8
stomach
7
adrenal gland
7
mammary gland
6
lymphatic vessel
5
gonad
5
prostate gland
4
esophagus
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
627
AMP
222
ENCODE
110
KPMP
29
T1D
19
LungMap
9
community
Genome assembly (visualization)
844
hg19
384
GRCh38
month_released!
November, 2022
organ_slims!
blood
skeleton
BIOSAMPLE
TYPE
1016 results
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Clear Filters
accessible chromatin
differential activity
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 276 more…
tissue
retina
16
pigmented layer of retina
11
kidney
10
islet of Langerhans
6
heart
5
+ See 90 more…
cell line
EndoC_BH1
8
3
induced pluripotent stem cell
7
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
+ See 138 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
5
adipocyte
3
B cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
+ See 26 more…
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