Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1328
target gene predictions
977
histone modifications
944
chromatin state
817
binding sites
683
gene expression
592
accessible chromatin
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
70
eQTL
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
June, 2020
222
November, 2021
January, 2022
65
January, 2020
57
August, 2021
56
February, 2024
54
May, 2020
44
November, 2022
29
May, 2021
January, 2021
26
February, 2020
25
February, 2023
19
April, 2020
14
February, 2021
14
May, 2022
12
November, 2019
9
October, 2019
6
September, 2022
3
September, 2018
2
May, 2024
2
November, 2020
1
June, 2021
1
March, 2023
Available data
593
bed bed3+
496
bigWig
27
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
616
Homo sapiens
Biosample type
413
primary cell
193
tissue
45
in vitro differentiated cells
11
cell line
Organ
180
epithelium
82
connective tissue
62
pancreas
54
eye
38
kidney
33
vasculature
32
brain
27
musculature of body
26
liver
25
blood vessel
24
heart
17
limb
16
adipose tissue
11
intestine
10
artery
9
bone element
9
lung
8
skeleton
6
adrenal gland
5
skin of body
5
stomach
3
extraembryonic component
3
large intestine
3
lymphatic vessel
3
mammary gland
3
nerve
3
ureter
2
blood
2
bodily fluid
2
bronchus
2
embryo
2
esophagus
2
placenta
2
small intestine
1
bone marrow
1
gonad
1
ovary
1
spinal cord
1
spleen
1
thymus
1
thyroid gland
1
uterus
1
vein
Project
415
AMP
222
ENCODE
19
LungMap
3
ITG
2
community
1
T1D
Genome assembly (visualization)
648
hg19
413
GRCh38
3
hg18
month_released!
January, 2021
January, 2022
June, 2020
BIOSAMPLE
TYPE
662 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
eQTL
primary cell
fibroblast
16
monocyte
15
1
endothelial cell
14
1
excitatory neuron
12
macrophage
11
+ See 182 more…
tissue
retina
22
1
pigmented layer of retina
20
islet of Langerhans
5
10
kidney
9
1
liver
3
6
+ See 77 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 8 more…
cell line
EndoC_BH1
8
HepG2
1
glomerular visceral epithelial cell
1
smooth muscle cell of the coronary artery
1
See all biosamples
Download