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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1555
candidate regulatory elements
1284
target gene predictions
958
histone modifications
879
chromatin state
872
accessible chromatin
783
binding sites
655
gene expression
161
eQTL
155
differential activity
129
variant allelic effects
65
Fine-mapped variants
10
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
276
June, 2020
213
November, 2021
98
January, 2022
60
January, 2020
57
August, 2021
53
May, 2020
52
February, 2024
44
November, 2022
29
May, 2021
28
January, 2021
24
February, 2023
23
February, 2020
17
April, 2020
14
May, 2022
13
February, 2021
9
November, 2019
9
October, 2019
4
September, 2022
3
September, 2018
2
May, 2024
2
November, 2020
1
June, 2021
1
March, 2023
Available data
872
bed bed3+
504
bigWig
24
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
987
Homo sapiens
Biosample type
505
primary cell
293
tissue
170
cell line
65
in vitro differentiated cells
Organ
215
epithelium
109
connective tissue
80
pancreas
71
brain
60
eye
54
kidney
42
vasculature
34
musculature of body
blood vessel
32
heart
32
liver
25
limb
24
intestine
20
adipose tissue
16
artery
16
lung
skin of body
15
bone element
14
blood
14
bodily fluid
12
embryo
12
large intestine
10
extraembryonic component
9
stomach
8
adrenal gland
8
gonad
8
lymph node
8
skeleton
7
esophagus
7
mammary gland
6
prostate gland
5
nerve
5
placenta
4
lymphatic vessel
4
small intestine
4
spinal cord
4
testis
4
ureter
4
uterus
3
bronchus
3
ovary
3
penis
3
spleen
thyroid gland
2
bone marrow
2
breast
2
lymphoid tissue
2
mouth
2
thymus
2
vein
1
nose
1
pituitary gland
1
tongue
1
trachea
1
urinary bladder
1
vagina
Project
769
AMP
213
ENCODE
29
T1D
17
LungMap
3
ITG
2
community
Genome assembly (visualization)
924
hg19
484
GRCh38
3
hg18
organ_slims!
blood vessel
skin of body
thyroid gland
BIOSAMPLE
TYPE
1033 results
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Clear Filters
accessible chromatin
eQTL
primary cell
monocyte
18
4
macrophage
12
7
fibroblast
16
2
endothelial cell
15
1
excitatory neuron
12
+ See 211 more…
tissue
retina
23
1
pigmented layer of retina
20
islet of Langerhans
6
13
kidney
10
1
liver
4
7
+ See 121 more…
cell line
EndoC_BH1
8
lymphoblastoid cell line
1
6
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
+ See 147 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 26 more…
See all biosamples
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