Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
149
accessible chromatin
121
target gene predictions
112
candidate regulatory elements
93
gene expression
65
chromatin state
41
differential activity
36
binding sites
36
eQTL
31
histone modifications
27
variant allelic effects
11
Fine-mapped variants
2
caQTL
2
pQTL
2
sQTL
2
variant to gene
Date released
43
November, 2021
24
June, 2020
21
February, 2024
15
August, 2021
11
January, 2020
10
January, 2021
10
January, 2022
8
May, 2021
7
November, 2022
7
October, 2019
4
September, 2022
3
April, 2020
3
February, 2020
3
February, 2021
3
May, 2022
2
May, 2020
2
May, 2024
2
November, 2019
2
November, 2020
2
September, 2018
1
June, 2021
1
March, 2023
Available data
151
bed bed3+
101
bigWig
7
bigBed narrowPeak
5
tsv
3
bam
3
bed gappedPeak
3
xls
Organism
185
Homo sapiens
Biosample type
103
primary cell
56
tissue
14
cell line
12
in vitro differentiated cells
Organ
215
epithelium
109
connective tissue
80
pancreas
71
brain
60
eye
54
kidney
42
vasculature
34
musculature of body
32
blood vessel
32
heart
32
liver
25
limb
24
intestine
20
adipose tissue
16
artery
16
lung
16
skin of body
15
bone element
14
blood
14
bodily fluid
12
embryo
12
large intestine
10
extraembryonic component
9
stomach
8
adrenal gland
8
gonad
8
lymph node
8
skeleton
7
esophagus
7
mammary gland
6
prostate gland
5
nerve
5
placenta
4
lymphatic vessel
4
small intestine
4
spinal cord
4
testis
4
ureter
4
uterus
3
bronchus
3
ovary
3
penis
3
spleen
3
thyroid gland
2
bone marrow
2
breast
2
lymphoid tissue
2
mouth
2
thymus
2
vein
1
nose
1
pituitary gland
1
tongue
1
trachea
1
urinary bladder
1
vagina
Project
125
AMP
43
ENCODE
10
T1D
3
LungMap
2
ITG
2
community
Genome assembly (visualization)
170
hg19
92
GRCh38
2
hg18
BIOSAMPLE
TYPE
185 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
eQTL
primary cell
fibroblast
16
2
pericyte cell
10
pancreatic beta cell
8
pancreatic alpha cell
7
pancreatic acinar cell
6
+ See 27 more…
tissue
islet of Langerhans
6
13
subcutaneous adipose tissue
2
6
adipose tissue
2
4
pancreas
5
1
omental fat pad
2
2
+ See 10 more…
cell line
EndoC_BH1
8
fibroblast of cardiac tissue
2
GM23248
1
adipose-derived mesenchymal stem cell
1
brain pericyte
1
+ See 1 more…
in vitro differentiated cells
chondrocyte
5
adipocyte
4
SGBS preadipocytes
1
mesenchymal stem cell
1
skin fibroblast
1
See all biosamples
Download