Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1464
candidate regulatory elements
1235
target gene predictions
967
histone modifications
862
accessible chromatin
834
chromatin state
809
binding sites
675
gene expression
167
differential activity
163
eQTL
129
variant allelic effects
65
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
1
representative DNase hypersensitivity sites
Date released
273
June, 2020
211
November, 2021
59
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
31
May, 2021
30
August, 2021
28
January, 2021
25
February, 2023
19
April, 2020
14
May, 2022
November, 2019
9
October, 2019
6
September, 2022
5
February, 2021
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
855
bed bed3+
493
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
822
Homo sapiens
Biosample type
478
primary cell
165
tissue
157
cell line
67
in vitro differentiated cells
Organ
211
epithelium
88
connective tissue
63
pancreas
59
eye
50
kidney
42
brain
33
vasculature
27
musculature of body
23
blood vessel
23
heart
23
liver
intestine
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
large intestine
9
artery
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
nerve
2
ovary
2
spinal cord
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
spleen
1
tongue
1
trachea
1
urinary bladder
Project
608
AMP
211
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
859
hg19
357
GRCh38
month_released!
November, 2019
organ_slims!
intestine
limb
BIOSAMPLE
TYPE
867 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
hQTL
primary cell
monocyte
18
2
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 212 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
5
pancreas
5
+ See 74 more…
cell line
EndoC_BH1
7
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 143 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
See all biosamples
Download