Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1685
candidate regulatory elements
1336
target gene predictions
963
histone modifications
927
chromatin state
889
accessible chromatin
804
binding sites
659
gene expression
163
differential activity
163
eQTL
136
variant allelic effects
71
Fine-mapped variants
12
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
284
June, 2020
218
November, 2021
63
January, 2020
55
May, 2020
44
November, 2022
40
February, 2024
33
August, 2021
28
January, 2021
27
May, 2021
25
February, 2023
19
April, 2020
13
May, 2022
12
November, 2019
10
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
2
November, 2020
2
September, 2018
1
June, 2021
Available data
883
bed bed3+
514
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
849
Homo sapiens
Biosample type
468
primary cell
197
tissue
160
cell line
69
in vitro differentiated cells
Organ
212
epithelium
90
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
liver
21
intestine
20
limb
15
bone element
15
lung
13
bodily fluid
13
skin of body
12
blood
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
627
AMP
218
ENCODE
29
T1D
19
LungMap
2
ITG
Genome assembly (visualization)
886
hg19
374
GRCh38
organ_slims!
liver
BIOSAMPLE
TYPE
895 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
other
pQTL
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 214 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 97 more…
cell line
EndoC_BH1
8
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
A-673 cell
1
+ See 146 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
See all biosamples
Download