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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1529
candidate regulatory elements
1249
target gene predictions
965
histone modifications
862
accessible chromatin
841
chromatin state
787
binding sites
646
gene expression
164
eQTL
149
differential activity
124
variant allelic effects
65
Fine-mapped variants
10
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
277
June, 2020
211
November, 2021
55
January, 2020
53
May, 2020
45
February, 2024
44
November, 2022
33
August, 2021
28
January, 2021
26
May, 2021
24
February, 2023
14
May, 2022
13
April, 2020
10
February, 2021
9
November, 2019
9
October, 2019
4
January, 2022
4
September, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
854
bed bed3+
493
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
820
Homo sapiens
Biosample type
450
primary cell
190
tissue
157
cell line
68
in vitro differentiated cells
Organ
212
epithelium
90
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
lung
13
bodily fluid
13
skin of body
12
blood
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
610
AMP
211
ENCODE
29
T1D
13
LungMap
2
ITG
Genome assembly (visualization)
857
hg19
361
GRCh38
organ_slims!
lung
vasculature
BIOSAMPLE
TYPE
865 results
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Clear Filters
accessible chromatin
pQTL
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 200 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 91 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 142 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
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