Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
887
histone modifications
839
target gene predictions
781
binding sites
773
candidate regulatory elements
706
accessible chromatin
87
variant allelic effects
16
chromatin state
11
caQTL
5
eQTL
3
hQTL
2
meQTL
2
other
0
representative DNase hypersensitivity sites
Date released
225
June, 2020
222
November, 2021
47
May, 2020
30
February, 2024
28
January, 2021
25
January, 2020
25
May, 2021
24
November, 2022
23
August, 2021
19
April, 2020
13
May, 2022
7
October, 2019
5
September, 2022
4
January, 2022
3
February, 2021
3
November, 2019
2
November, 2020
1
June, 2021
Available data
706
bed bed3+
410
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
1
tsv
Organism
661
Homo sapiens
Biosample type
481
primary cell
tissue
163
cell line
62
in vitro differentiated cells
Organ
177
epithelium
80
connective tissue
43
pancreas
28
kidney
28
vasculature
20
liver
19
brain
19
musculature of body
18
blood vessel
15
eye
15
intestine
13
lung
13
skin of body
12
blood
12
bodily fluid
10
embryo
9
heart
8
lymph node
7
bone element
7
large intestine
7
mammary gland
6
adrenal gland
6
extraembryonic component
5
artery
5
stomach
4
lymphatic vessel
4
prostate gland
3
bronchus
3
gonad
3
penis
3
placenta
2
bone marrow
2
esophagus
2
small intestine
2
uterus
2
vein
1
adipose tissue
1
limb
1
lymphoid tissue
1
nose
1
ovary
1
spinal cord
1
testis
1
thymus
1
thyroid gland
1
trachea
Project
436
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
706
hg19
303
GRCh38
biosample_type!
tissue
BIOSAMPLE
TYPE
706 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 217 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
embryonic stem cell
5
+ See 26 more…
See all biosamples
Download