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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1530
candidate regulatory elements
1220
target gene predictions
971
histone modifications
894
accessible chromatin
868
chromatin state
804
binding sites
680
gene expression
169
eQTL
167
differential activity
139
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
280
June, 2020
215
November, 2021
65
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
31
August, 2021
29
May, 2021
28
January, 2021
25
February, 2023
16
April, 2020
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
1
March, 2023
Available data
885
bed bed3+
518
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
854
Homo sapiens
Biosample type
476
primary cell
196
tissue
159
cell line
68
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
67
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
nose
1
tongue
1
trachea
1
urinary bladder
Project
639
AMP
215
ENCODE
29
T1D
16
LungMap
Genome assembly (visualization)
889
hg19
385
GRCh38
organ_slims!
lung
nose
uterus
BIOSAMPLE
TYPE
899 results
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Clear Filters
accessible chromatin
sQTL
primary cell
monocyte
18
1
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 212 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
2
heart
5
+ See 92 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 144 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
See all biosamples
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