Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
55
accessible chromatin
gene expression
34
target gene predictions
33
differential activity
24
candidate regulatory elements
17
chromatin state
15
eQTL
11
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
January, 2021
18
November, 2021
18
September, 2022
15
February, 2024
15
May, 2021
6
October, 2019
4
June, 2020
3
January, 2020
3
March, 2020
2
February, 2021
2
May, 2020
2
November, 2019
1
June, 2021
Available data
87
bed bed3+
43
bigWig
10
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
89
Homo sapiens
Biosample type
41
primary cell
35
tissue
13
cell line
Organ
314
epithelium
164
connective tissue
125
kidney
118
brain
107
musculature of body
96
embryo
94
intestine
93
lung
89
pancreas
75
heart
69
bodily fluid
69
limb
68
eye
67
blood
67
vasculature
61
uterus
57
skin of body
54
large intestine
51
blood vessel
45
extraembryonic component
45
liver
38
stomach
29
bone element
28
adrenal gland
26
mammary gland
26
small intestine
21
placenta
20
adipose tissue
20
prostate gland
19
artery
17
lymph node
17
ureter
16
gonad
16
thymus
14
esophagus
14
penis
11
skeleton
11
spinal cord
10
pituitary gland
10
spleen
9
ovary
8
lymphoid tissue
8
thyroid gland
7
lymphatic vessel
6
bronchus
6
nerve
6
testis
6
vein
5
mouth
4
breast
4
urinary bladder
3
bone marrow
3
tongue
2
nose
2
vagina
1
trachea
Project
71
AMP
18
ENCODE
Genome assembly (visualization)
89
hg19
40
GRCh38
annotation_type!
gene expression
month_released!
January, 2021
BIOSAMPLE
TYPE
89 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
primary cell
pancreatic acinar cell
5
2
pancreatic beta cell
6
1
pancreatic ductal cell
5
2
pancreatic alpha cell
5
1
pancreatic delta cell
3
2
+ See 5 more…
tissue
pancreas
5
5
islet of Langerhans
6
1
body of pancreas
5
endocrine pancreas
4
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
1
Panc1
2
8988T
1
HPDE6-E6E7
1
See all biosamples
Download